Table 2.
Country & Ethnicity (Sample size) | Location/State | Population ID | Clusters ( K = 6) | |||||
---|---|---|---|---|---|---|---|---|
Malays | Proto-Malays | Semang | Chinese | Indians | African | |||
Malaysia: | ||||||||
Malays*: | ||||||||
Jawa (19) | Johor | MY-JV | 0.419 | 0.004 | 0.010 | 0.665 | 0.004 | 0.001 |
Bugis (14) | Johor | MY-BG | 0.255 | 0.027 | 0.044 | 0.561 | 0.008 | 0.001 |
Minang (20) | Negeri Sembilan | MY-MN | 0.318 | 0.011 | 0.019 | 0.525 | 0.125 | 0.002 |
Kelantan (18) | Kelantan | MY-KN | 0.222 | 0.018 | 0.054 | 0.542 | 0.162 | 0.002 |
Kedah (24) | Kedah | MY-KD | 0.206 | 0.028 | 0.031 | 0.527 | 0.208 | 0.001 |
Proto-Malaya: | ||||||||
Temuan (49) | Negeri Sembilan | MY-TM | 0.101 | 0.361 | 0.053 | 0.478 | 0.006 | 0.001 |
Negritosa: | ||||||||
Jahai (50) | Perak | MY-JH | 0.012 | 0.010 | 0.808 | 0.168 | 0.002 | 0.000 |
Kensui (30) | Kedah | MY-KS | 0.018 | 0.006 | 0.926 | 0.035 | 0.015 | 0.001 |
Thailand*: | ||||||||
Pattani (14) | Pattani | TH-PT | 0.237 | 0.013 | 0.039 | 0.570 | 0.140 | 0.001 |
Indonesiaa: | ||||||||
Jawa (19) | Java | ID-JV | 0.251 | 0.029 | 0.048 | 0.663 | 0.008 | 0.001 |
Melayu (12) | Sumatera | ID-ML | 0.378 | 0.005 | 0.018 | 0.586 | 0.012 | 0.001 |
Toraja (20) | Sulawesi | ID-TR | 0.444 | 0.004 | 0.009 | 0.540 | 0.003 | 0.001 |
Chinaa: | ||||||||
Jinuo (29) | Yunnan | CN-JN | 0.016 | 0.005 | 0.015 | 0.959 | 0.005 | 0.001 |
Wa (56) | Yunnan | CN-WA | 0.032 | 0.005 | 0.021 | 0.936 | 0.005 | 0.001 |
Indiaa: | ||||||||
Marathi (14) | Maharashtra | IN-WL | 0.002 | 0.003 | 0.006 | 0.006 | 0.979 | 0.004 |
Telugu (24) | Andra Pradesh | IN-DR | 0.003 | 0.003 | 0.011 | 0.006 | 0.975 | 0.002 |
Africab: | ||||||||
Yoruba (60) | Nigeria | YRI | 0.001 | 0.001 | 0.003 | 0.001 | 0.002 | 0.992 |
aThe genotype data obtained from the database of PASNPI Consortium (http://www4a.biotec.or.th/PASNP/).
bThe genotype data obtained from International HapMap Consortium (http://hapmap.ncbi.nlm.nih.gov/).
*The inclusion criteria are; the sampled individual of a population must be at least three generations of the same population, no parental admixture and communicate daily in the local dialect. The exclusion criteria are those that contradict the inclusion criteria.