TABLE 2.
Proteins in the G category (Carbohydrate transport and metabolism) modulated during P. freudenreichii growth in soy ultrafiltrate compared to cow’s milk ultrafiltrate.
| Accession | Description(a) | Ratio(b) | Adjusted p-value |
| CDP49431.1 | Glycosyltransferase (glycogen synthase) | 4.77 | 9.6E-13 |
| CDP49219.1 | PTS enzyme I | 4.31 | 3.7E-11 |
| CDP48882.1 | Phosphoglycerate mutase/Fructose-2,6-bisphosphatase | 3.46 | 2.6E-11 |
| CDP49180.1 | iolC (Myo-inositol catabolism iolC protein) | 3.34 | 1.5E-07 |
| CDP47782.1 | Hypothetical protein PFCIRM129_07365 | 2.92 | 1.3E-08 |
| CDP49320.1 | Glucose-6-phosphate 1-dehydrogenase | 2.90 | 1.6E-08 |
| CDP48739.1 | Phosphoketolase pyrophosphate | 2.68 | 1.5E-10 |
| CDP48828.1 | Ribose-5-phosphate isomerase 2 | 2.62 | 2.5E-09 |
| CDP48788.1 | Phosphoglucomutase | 2.56 | 1.2E-13 |
| CDP49543.1 | Glycerate kinase GlxK/GarK | 2.50 | 2.0E-11 |
| CDP48996.1 | Galactokinase | 2.42 | 7.1E-12 |
| CDP48782.1 | Glycosyl hydrolase, family 13 (putative alpha-amylase, catalytic domain) | 2.35 | 5.4E-05 |
| CDP48834.1 | Transketolase | 2.08 | 2.0E-11 |
| CDP49788.1 | Galactokinase | 2.03 | 3.7E-08 |
| CDP48837.1 | Aldose 1-epimerase | 1.95 | 3.5E-08 |
| CDP49042.1 | UTP–glucose-1-phosphate uridylyltransferase | 1.87 | 8.5E-07 |
| CDP49226.1 | Glucose-6-phosphate isomerase (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) | 1.82 | 6.7E-10 |
| CDP49568.1 | Polyphosphate glucokinase | 1.80 | 1.3E-06 |
| CDP49821.1 | Histidine triad (HIT) protein | 1.70 | 7.4E-03 |
| CDP48650.1 | Phosphoglycerate mutase (D-phosphoglycerate 2,3-phosphomutase) | 1.68 | 4.2E-08 |
| CDP48024.1 | Transaldolase 1 | 1.68 | 4.0E-10 |
| CDP49678.1 | Pyruvate phosphate dikinase | 1.63 | 1.3E-09 |
| CDP47731.1 | DhaK PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit | 1.59 | 2.0E-07 |
| CDP49834.1 | Ribose-5-phosphate isomerase 3 | 1.58 | 9.8E-05 |
| CDP49177.1 | iolG1 (Myo-inositol catabolism IolG1 protein) (myo-inositol 2-dehydrogenase) | 1.56 | 1.9E-07 |
| CDP49639.1 | Gluconate kinase (Gluconokinase) | 1.51 | 2.5E-04 |
| CDP49220.1 | Phosphocarrier, HPr family | 0.57 | 1.3E-03 |
| CDP48825.1 | Triosephosphate isomerase 2 | 0.55 | 2.6E-07 |
| CDP47629.1 | Glycogen debranching enzyme GlgX | 0.51 | 1.7E-07 |
| CDP49749.1 | Phosphoglycerate mutase/Fructose-2,6-bisphosphatase | 0.49 | 2.4E-07 |
| CDP48965.1 | Nucleoside-diphosphate-sugar epimerases | 0.43 | 7.8E-10 |
| CDP49513.1 | Alpha-1,4-glucosidase | 0.28 | 7.0E-04 |
(a)Determined using a database composed of the proteome of P. freudenreichii CIRM-BIA129 (downloaded from NCBI.nlm.nih.gov on 23 August 2018). (b)Ratio between the protein level in soy ultrafiltrate and in cow’s milk ultrafiltrate. This ratio indicates induction (ratio > 1.5) or repression (ratio < 0.66) during growth in soy ultrafiltrate.