TABLE 3.
Analysis of factors influencing segment frequencies in three data setsa
| Factor |
F value |
P value |
||||
|---|---|---|---|---|---|---|
| Raw | Corrected | Wo-10 | Raw | Corrected | Wo-10 | |
| Segment | 52.16 | 56.77 | 68.00 | <2e−16 | <2e−16 | <2e−16 |
| Host | 0 | 0 | 0 | 1.000 | 1.000 | 1.000 |
| Island | 0 | 0 | 0 | 1.000 | 1.000 | 1.000 |
| Segment:host | 6.18 | 6.21 | 5.62 | 6.51e−13 | 5.47e−13 | 1.71e−10 |
| Segment:island | 5.58 | 6.57 | 7.95 | 3.87e−7 | 1.38e−8 | 1.19e−9 |
| Host:island | 0 | 0 | 0 | 1.000 | 1.000 | 1.000 |
| Segment:host:island | 1.92 | 1.91 | 2.14 | 0.048 | 0.049 | 0.032 |
a
Analyses of variance (model: frequency ∼ segment × host × island) with three data sets (raw, corrected, and Wo-10). Raw, raw copy numbers per segment and sample; corrected, copy numbers after subtraction of copy numbers found in primer-independent amplifications; Wo-10, raw copy numbers for all segments but segment 10.