TABLE 1.
Host (sea star species) |
Animal collection site(s) | State or province and country | Collection yr | Metaviriome | Virus abbreviation | Contig size (nt) | Avg fold coverage | Orientation | Ambidensovirus subgroupa | Viral speciesb | GenBank accession no. |
---|---|---|---|---|---|---|---|---|---|---|---|
Pisaster ochraceus | Santa Cruz | California, USA | 2013 | RNA | PoaDV1c | 5,719 | 427 | Ambisense | A | Asteroid ambidensovirus 2 | MT733037 |
Olympic National Park | Washington, USA | 2013 | RNA | PoaDV2c | 5,840 | 63 | Ambisense | A | Asteroid ambidensovirus 9 | MT733038 | |
Santa Cruz | California, USA | 2013 | RNA | PoaDV3c | 5,758 | 134 | Ambisense | A | Asteroid ambidensovirus 10 | MT733039 | |
Olympic National Park | Washington, USA | 2013 | RNA | PoaDV4c | 5,469 | 19 | Ambisense | B | Asteroid ambidensovirus 11 | MT733040 | |
Olympic National Park | Washington, USA | 2013 | RNA | PoaDV5c | 5,415 | 15 | Ambisense | A | Asteroid ambidensovirus 12 | MT733041 | |
Olympic National Park | Washington, USA | 2013 | RNA | PoaDV6c | 5,340 | 27 | Ambisense | A | Asteroid ambidensovirus 5 | MT733042 | |
Olympic National Park | Washington, USA | 2013 | RNA | PoaDV7c | 5,052 | 30 | Ambisense | B | Asteroid ambidensovirus 13 | MT733043 | |
Santa Cruz | California, USA | 2013 | RNA | PoaDV8c | 5,584 | 64 | Ambisense | A | Asteroid ambidensovirus 14 | MT733044 | |
Santa Cruz | California, USA | 2013 | RNA | PoaDV9c | 4,827 | 15 | Ambisense | B | Asteroid ambidensovirus 7 | MT733045 | |
Olympic National Park | Washington, USA | 2013 | RNA | PoaDV10c | 3,264 | 18 | Ambisense | NA | Asteroid ambidensovirus 15 | MT733046 | |
Olympic National Park | Washington, USA | 2013 | RNA | PoaDV11c | 5,095 | 51 | Ambisense | B | Asteroid ambidensovirus 8 | MT733047 | |
Santa Cruz | California, USA | 2013 | RNA | PoaDV12c | 5,270 | 451 | Ambisense | A | Asteroid ambidensovirus 6 | MT733048 | |
Santa Cruz | California, USA | 2018 | RNA | PoaDV13 | 5,963 | 30 | Ambisense | A | Asteroid ambidensovirus 16 | MT733049 | |
Santa Cruz | California, USA | 2018 | RNA | PoaDV14 | 5,274 | 72 | Ambisense | B | Asteroid ambidensovirus 17 | MT733050 | |
Leptasteria sp. | Palmer's Point and Pigeon Point | California, USA | 2017 | RNA | LhaDV1 | 3,956 | 35 | Ambisense | NA | Asteroid ambidensovirus 7 | MT733022 |
Pycnopodia helianthoides | Seattle Aquarium | Washington, USA | 2013 | RNA | PhaDV1d | 5,665 | 47 | Ambisense | A | Asteroid ambidensovirus 2 | MT733031 |
Seattle Aquarium | Washington, USA | 2013 | RNA | PhaDV2d | 5,326 | 27 | Ambisense | A | Asteroid ambidensovirus 5 | MT733032 | |
Seattle Aquarium | Washington, USA | 2013 | RNA | PhaDV3d | 4,168 | 15 | Ambisense | NA | Asteroid ambidensovirus 18 | MT733033 | |
Seattle Aquarium | Washington, USA | 2013 | RNA | SSaDVd | 5,663 | 34 | Ambisense | A | Asteroid ambidensovirus 1 | ||
Seattle Aquarium | Washington, USA | 2013 | RNA | PhaDV4d | 5,485 | 58 | Ambisense | A | Asteroid ambidensovirus 6 | MT733034 | |
Seattle Aquarium | Washington, USA | 2013 | RNA | PhaDV5d | 3,391 | 16 | NA | A | Only VP gene | MT733035 | |
Seattle Aquarium | Washington, USA | 2013 | RNA | PhaDV6d | 3,446 | 27 | Ambisense | NA | Asteroid ambidensovirus 8 | MT733036 | |
Burrard Inlet | British Columbia, Canada | 2013 | DNA | SSaDVd | 6,053 | 246 | Ambisense | A | Asteroid ambidensovirus 1 | MT733051 | |
Evasterias troschelii | Cape Roger Curtis | British Columbia, Canada | 2013 | DNA | SSaDVd | 5,206 | 27 | Ambisense | A | Asteroid ambidensovirus 1 | |
Cape Roger Curtis | British Columbia, Canada | 2013 | DNA | EtaDV1d | 5,601 | 15 | Ambisense | B | Asteroid ambidensovirus 19 | MT733014 | |
Cape Roger Curtis | British Columbia, Canada | 2013 | DNA | EtaDV2d | 5,700 | 38 | Ambisense | B | Asteroid ambidensovirus 20 | MT733015 | |
Cape Roger Curtis | British Columbia, Canada | 2013 | DNA | EtaDV3d | 5,460 | 22 | Ambisense | B | Asteroid ambidensovirus 21 | MT733016 | |
Neosmilaster georgianus | Palmer Station | Antarctica | 2017 | RNA | NgaDV1 | 5,605 | 122 | Ambisense | B | Asteroid ambidensovirus 3 | MT733025 |
Palmer Station | Antarctica | 2017 | RNA | NgaDV2 | 5,383 | 395 | Ambisense | B | Asteroid ambidensovirus 3 | MT733026 | |
Palmer Station | Antarctica | 2017 | RNA | NgaDV3 | 5,328 | 388 | Ambisense | B | Asteroid ambidensovirus 22 | MT733027 | |
Palmer Station | Antarctica | 2017 | RNA | NgaDV4 | 5,352 | 36,423 | Ambisense | A | Asteroid ambidensovirus 23 | MT733028 | |
Palmer Station | Antarctica | 2017 | RNA | NgaDV5 | 4,832 | 15 | Ambisense | B | Asteroid ambidensovirus 4 | MT733029 | |
Palmer Station | Antarctica | 2017 | RNA | NgaDV6 | 4,886 | 63 | Ambisense | A | Asteroid ambidensovirus 24 | MT733030 | |
Labidiaster annulatus | Palmer Station | Antarctica | 2017 | RNA | LaaDV1 | 5,872 | 443 | Ambisense | B | Asteroid ambidensovirus 25 | MT733017 |
Palmer Station | Antarctica | 2017 | RNA | LaaDV2 | 5,240 | 214 | Ambisense | B | Asteroid ambidensovirus 4 | MT733018 | |
Palmer Station | Antarctica | 2017 | RNA | LaaDV3 | 5,018 | 501 | Ambisense | B | Asteroid ambidensovirus 26 | MT733019 | |
Palmer Station | Antarctica | 2017 | RNA | LaaDV4 | 4,972 | 68 | Ambisense | B | Asteroid ambidensovirus 27 | MT733020 | |
Palmer Station | Antarctica | 2017 | RNA | LaaDV5 | 5,413 | 263 | Ambisense | B | Asteroid ambidensovirus 3 | MT733021 | |
Luidia maculata | Hong Kong | China | 2014 | DNA | LmaDV1c | 5,446 | 16 | Ambisense | B | Asteroid ambidensovirus 28 | MT733023 |
Astropecten polyacanthus | Hong Kong | China | 2014 | DNA | ApaDV1c | 3,061 | 8 | Ambisense | NA | Asteroid ambidensovirus 29 | MT733013 |
Mediaster aequalis | Ketchikan | Alaska, USA | 2016 | RNA | MaaDV1 | 5,956 | 1,220 | Ambisense | A | Asteroid ambidensovirus 2 | MT733024 |
Asterias forbesi | Nahant | Massachusetts, USA | 2015 | DNA | AfaDV | 6,089 | 454 | Ambisense | A | Asteroid ambidensovirus 1 | MN190158 |
Ambidensovirus subgroups defined in reference 19.
Viral species defined by a pairwise amino acid sequence identity of NS1 proteins of >85% (18).
Viral genotypes discovered from viral metagenomes prepared as described in reference 16.
Viral genotypes discovered from viral metagenomes prepared as described in reference 11.