Table 2. Detoxification enzyme (CYPs, GSTs, CCEs) and ABC transporter gene family size in A. lycopersici, T. urticae, M. occidentalis, and D. melanogaster.
| Detoxification enzyme | A. lycopersici | T. urticae | M. occidentalis | D. melanogaster |
|---|---|---|---|---|
| CYPs (total) | 23 | 78* | 63 | 86 |
| CYP2 | 1 | 38 | 16 | 7 |
| CYP3 | 17 | 9 | 23 | 36 |
| CYP4 | 2 | 26 | 19 | 32 |
| Mito Clan | 3 | 5 | 5 | 11 |
| GSTs (total) | 4 | 31 | 13 | 37 |
| Delta/Epsilon | 1 | 16 | 3 | 25 |
| Mu | 2 | 12 | 5 | 0 |
| Omega | 0 | 2 | 3 | 5 |
| Sigma | 0 | 0 | 0 | 1 |
| Theta | 0 | 0 | 0 | 4 |
| Zeta | 1 | 1 | 1 | 2 |
| Unknown | 0 | 0 | 1 | 0 |
| CCEs (total) | 8 | 69 | 44 | 35 |
| Dietary class (clade A-C) | 0 | 0 | 0 | 13 |
| Hormone class | ||||
| D (integument CCEs) | 0 | 0 | 0 | 3 |
| E (secreted beta-esterases) | 0 | 0 | 0 | 2 |
| F (dipteran JHEs†) | 0 | 0 | 0 | 3 |
| F' (chelicerate JHEs) | 0 | 2 | 1 | 0 |
| Neurodevelopmental class | ||||
| H (glutactins) | 0 | 0 | 0 | 4 |
| J (AChE) | 1 | 1 | 1 | 1 |
| J' (Acari-specific CCEs) | 0 | 32 | 19 | 0 |
| J'' (Acari-specific CCEs) | 0 | 22 | 15 | 0 |
| K (gliotactin) | 1 | 1 | 1 | 1 |
| L (neuroligins) | 2 | 5 | 5 | 4 |
| M (neurotactin) | 1 | 1 | 0 | 1 |
| U (unchar. conserv. clade in Acariformes/L. polyphemus) | 2 | 3 | 0 | 0 |
| I (unchar. conserv. clade in insects) | 0 | 0 | 0 | 2 |
| No clear clade assignment | 1 | 2 | 2 | 1 |
| ABCs (total) | 44 | 103 | 55 | 56 |
| ABCA | 4 | 9 | 8 | 10 |
| ABCB-FT‡ | 3 | 2 | 1 | 4 |
| ABCB-HT§ | 1 | 2 | 4 | 4 |
| ABCC | 9 | 39 | 22 | 14 |
| ABCD | 2 | 2 | 4 | 2 |
| ABCE | 1 | 1 | 1 | 1 |
| ABCF | 3 | 3 | 3 | 3 |
| ABCG | 16 | 23 | 2 | 15 |
| ABCH | 5 | 22 | 6 | 3 |
| Unknown | 0 | 0 | 4 | 0 |
| Total | 79 | 281 | 175 | 214 |
Numbers and class/clade/subfamily assignments were derived from previous studies (Grbić et al., 2011; Wei et al., 2020; Wu and Hoy, 2016) and this study.
*Of the 81 T. urticae CYPs identified by Grbić et al., 2011, three CYP genes (tetur46g00150, tetur46g00170 and tetur47g00090) and tetur602g00010 were considered as allelic variants and a pseudogene, respectively, and one new full-length CYP gene (tetur01g13730) was identified in this study.
†JHE, juvenile hormone esterases.
‡FT, full transporter.
§HT, half transporter.