Table 3.
Expression-fold changes in targeted genes driving skeletal phenotype in 23-week old males (n = 8).
Gene family | Gene | qPCR expression | RNAseq expression |
---|---|---|---|
Bone | |||
†Fgf activity | Fgf23 | +6.0** | +2.8** |
†Wnt activity | Lrp6 | −2.5* | −1.2 |
Wnt5a | −2.8* | −2.1 | |
Ctnnb1 | −1.8* | −1.1 | |
†Collagens | Col1a1 | −3.3 | −1.5 |
†Metallopeptidases | Mmp2 | −2.5* | −1.5 |
†Purinergic | Alpl | −2.8* | −1.4 |
Abcc6 | +6.9** | Below detection limit | |
Cd73 | −2.4** | Below detection limit | |
†Bone formation | Bglap (OCN) | −2.6** | −1.3 |
Sp7 | −1.8** | −1.4 | |
Ibsp (BSP) | −2.1* | −1.3 | |
†Bone resorption | Tnfrsf11b | −4.6* | −1.1 |
Liver | |||
‡Wnt activity | Sfrp1 | +2.1* | N/A |
Fzd8 | −3.4** | N/A | |
Kidney | |||
‡Wnt activity | Wif1 | +11.7* | N/A |
Comparison of fold-changes by RT-qPCR and RNAseq.
RT-qPCR evaluation of systemic Wnt activity in select organs.
p < 0.05,
p < 0.01,
Student’s unpaired t-test. The following genes were tested in 23-week old males, and demonstrated no statistically significant differences: Sost, Wisp2, Lrp5, Csnk1a1, Ctnnb1, Apc, Axin1, Dvl1, and Gsk3b.
Blue cells denote organs from which RNA was extracted and gene expression measured.