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. Author manuscript; available in PMC: 2021 Dec 1.
Published in final edited form as: Curr Opin Biotechnol. 2020 Sep 18;66:217–226. doi: 10.1016/j.copbio.2020.08.005

Table 1.

Performance of wild type enzymes with noncanonical cofactors

Enzyme Uniprot Native
Cofactor
Noncanonical
Cofactora
CSRb Source
D-lactate dehydrogenase (L. helveticus) P30901 NAD+ NCD+ 4.8×10−2 Liu et al, 2020 [5]
Formate dehydrogenase (Pseudomonas sp. 101) P33160 NAD+ NCD+ 4.7×l0−2 Guo et al., 2020 [6]
Glucose Dehydrogenase (B. subtilis) A0A1B2ATD9 NAD+ NMN+ 2.6×l0−6 Black et al., 2019 [9]
NADP+ NMN+ 1.7×l0−6
6-phospho gluconate dehydrogenase (T. maritima) A0A2N5RL69 NADP+ NMN+ 3.1×l0−6 Huang et al., 2019 [10]
Phosphite dehydrogenase (Ralstonia sp. 4506) G4XDR8 NAD+ NCD+ 5.8×10−2 Liu et al., 2019 [7]
3-hydroxy benzoate 6-hydroxylase (R. jostii) Q0SFK6 NADH BNAH 7.5×10−4 Guarneri et al., 2019 [14]
AmNAH 4.9×10−4
NADPH BNAH 4.8×10−3
AmNAH 3.2×10−3
para-Hydroxybenzoate hydroxylase (P. fluorescens) P20586 NADH AmNAH 2.1
NADPH AmNAH 2.4×10−3
Salicylate hydroxylase (P. putida) - NADH BNAH 8.3×10−3
NADPH BNAH 8.8×10−1
Glucose dehydrogenase (S. solfataricus) O93715 NAD+ BNA+ 1.0×10−2 Nowak et al., 2017 [8]
P2NA+ 1.5×10−2
P3NA+ 5.6×10−3
NADH oxidase (L. pentosus) F6IXY6 NADH MNAH - Nowak et al., 2015, 2017 [12, 15]
BNAH -
P2NAH -
P3NAH -
Xenobiotic reductase (P. putida) Q3ZDM6 NADH BNAH 3.1×102 Knaus et al., 2016 [32]
BTH 1.8×103
BEH 2.7×102
NADPH BNAH 2.7
BTH 1.5×10
BEH 2.7×102
Pentaerythritol tetranitrate reductase (E. cloacae) P71278 NADPH BNAH 1.4
BTH 5.2
BEH 1.0Δ10−1
Thennophilic old yellow enzyme (T. pseudethanolicus) B0KAH1 NADH BNAH 8.2×10−1
BTH 1.2
BEH 3.3×10−1
NADPH BNAH 2.2×10−2
BTH 3.2×10−2
BEH 8.7×10−3
Styrene monooxygenase (R. opacus) C7ACG0 NADH BNAH - Paul et al.. 2015 [54]
Alcohol dehydrogenase (P. furiosus) - NAD+ NMN+ 8.6×10−6 Campbell et al.. 2012 [35]
Malic enzyme (E. coli) P26616 NAD+ NFCD+ 9.3×10−3 Ji et al.. 2011 [53]
NCD+ 1.3×10−2
a

Full names of the noncanonical cofactors: AmNA+, 1-(2-carbamoylmethyl)-1,4-dihydronicotinamide; BNA+, 1-benzyl-1,4-dihydronicotinamide; BT+, 1-butyl-1,4-dihydronicotinamide; BE+, 1-(1-benzyl-1,4-dihydro-3-yl) ethanone; MD+, N-4-methoxybenzyl-1,4-dihydronicotinamide; MNA+, 1-methyl-1,4-dihydropyridine-3-carboxamide; NCD+, Nicotinamide cytosine dinucleotide; NCFD+, Nicotinamide flucytosine dinucleotide; NMN+, Nicotinamide mononucleotide; P2NA+, 1-phenethyl-1,4-dihydropyridine-3-carboxamide; P3NA+, 1-(3-phenylpropyl)-1,4-dihydropyridine-3-carboxamide. Reduced cofactor ends with “H”

b

CSR, Cofactor Specificity Ratio (Equation 1)