Table 1.
Enzyme | Uniprot | Native Cofactor |
Noncanonical Cofactora |
CSRb | Source |
---|---|---|---|---|---|
D-lactate dehydrogenase (L. helveticus) | P30901 | NAD+ | NCD+ | 4.8×10−2 | Liu et al, 2020 [5] |
Formate dehydrogenase (Pseudomonas sp. 101) | P33160 | NAD+ | NCD+ | 4.7×l0−2 | Guo et al., 2020 [6] |
Glucose Dehydrogenase (B. subtilis) | A0A1B2ATD9 | NAD+ | NMN+ | 2.6×l0−6 | Black et al., 2019 [9] |
NADP+ | NMN+ | 1.7×l0−6 | |||
6-phospho gluconate dehydrogenase (T. maritima) | A0A2N5RL69 | NADP+ | NMN+ | 3.1×l0−6 | Huang et al., 2019 [10] |
Phosphite dehydrogenase (Ralstonia sp. 4506) | G4XDR8 | NAD+ | NCD+ | 5.8×10−2 | Liu et al., 2019 [7] |
3-hydroxy benzoate 6-hydroxylase (R. jostii) | Q0SFK6 | NADH | BNAH | 7.5×10−4 | Guarneri et al., 2019 [14] |
AmNAH | 4.9×10−4 | ||||
NADPH | BNAH | 4.8×10−3 | |||
AmNAH | 3.2×10−3 | ||||
para-Hydroxybenzoate hydroxylase (P. fluorescens) | P20586 | NADH | AmNAH | 2.1 | |
NADPH | AmNAH | 2.4×10−3 | |||
Salicylate hydroxylase (P. putida) | - | NADH | BNAH | 8.3×10−3 | |
NADPH | BNAH | 8.8×10−1 | |||
Glucose dehydrogenase (S. solfataricus) | O93715 | NAD+ | BNA+ | 1.0×10−2 | Nowak et al., 2017 [8] |
P2NA+ | 1.5×10−2 | ||||
P3NA+ | 5.6×10−3 | ||||
NADH oxidase (L. pentosus) | F6IXY6 | NADH | MNAH | - | Nowak et al., 2015, 2017 [12, 15] |
BNAH | - | ||||
P2NAH | - | ||||
P3NAH | - | ||||
Xenobiotic reductase (P. putida) | Q3ZDM6 | NADH | BNAH | 3.1×102 | Knaus et al., 2016 [32] |
BTH | 1.8×103 | ||||
BEH | 2.7×102 | ||||
NADPH | BNAH | 2.7 | |||
BTH | 1.5×10 | ||||
BEH | 2.7×102 | ||||
Pentaerythritol tetranitrate reductase (E. cloacae) | P71278 | NADPH | BNAH | 1.4 | |
BTH | 5.2 | ||||
BEH | 1.0Δ10−1 | ||||
Thennophilic old yellow enzyme (T. pseudethanolicus) | B0KAH1 | NADH | BNAH | 8.2×10−1 | |
BTH | 1.2 | ||||
BEH | 3.3×10−1 | ||||
NADPH | BNAH | 2.2×10−2 | |||
BTH | 3.2×10−2 | ||||
BEH | 8.7×10−3 | ||||
Styrene monooxygenase (R. opacus) | C7ACG0 | NADH | BNAH | - | Paul et al.. 2015 [54] |
Alcohol dehydrogenase (P. furiosus) | - | NAD+ | NMN+ | 8.6×10−6 | Campbell et al.. 2012 [35] |
Malic enzyme (E. coli) | P26616 | NAD+ | NFCD+ | 9.3×10−3 | Ji et al.. 2011 [53] |
NCD+ | 1.3×10−2 |
Full names of the noncanonical cofactors: AmNA+, 1-(2-carbamoylmethyl)-1,4-dihydronicotinamide; BNA+, 1-benzyl-1,4-dihydronicotinamide; BT+, 1-butyl-1,4-dihydronicotinamide; BE+, 1-(1-benzyl-1,4-dihydro-3-yl) ethanone; MD+, N-4-methoxybenzyl-1,4-dihydronicotinamide; MNA+, 1-methyl-1,4-dihydropyridine-3-carboxamide; NCD+, Nicotinamide cytosine dinucleotide; NCFD+, Nicotinamide flucytosine dinucleotide; NMN+, Nicotinamide mononucleotide; P2NA+, 1-phenethyl-1,4-dihydropyridine-3-carboxamide; P3NA+, 1-(3-phenylpropyl)-1,4-dihydropyridine-3-carboxamide. Reduced cofactor ends with “H”
CSR, Cofactor Specificity Ratio (Equation 1)