Skip to main content
. 2020 Dec 3;8:605734. doi: 10.3389/fcell.2020.605734

TABLE 3.

Classification performance of the SVM model (radial basis kernel) and RF model.

SVM model (radial basis kernel)
RF model
Group Method ACC SEN SPE ACC SEN SPE
Validation dataset Fisher score 90.23% ± 4.78% 85.91 ± 8.94% 93.71 ± 5.45% 87.07 ± 5.53% 80.29 ± 10.53% 92.46 ± 5.85%
Test dataset Fisher score 84.48 ± 5.58% 82.87 ± 12.56% 85.98 ± 7.11% 83.19 ± 5.89% 77.80 ± 12.38% 88.19 ± 6.47%
Validation dataset Lasso 95.90 ± 3.29% 92.82 ± 6.84% 98.26 ± 2.80% 90.81 ± 4.76% 84.58 ± 9.13% 95.74 ± 4.60%
Test dataset Lasso 88.94 ± 5.33% 80.56 ± 10.71% 96.70 ± 3.83% 83.68 ± 6.85% 74.26 ± 13.86% 92.41 ± 5.78%
Validation dataset mRMR 93.00 ± 4.19% 89.07 ± 7.11% 96.08 ± 3.98% 90.28 ± 4.97% 84.14 ± 10.03% 95.08 ± 4.96%
Test dataset mRMR 86.08 ± 5.68% 79.76 ± 12.13% 91.93 ± 5.00% 83.52 ± 6.62% 75.85 ± 13.47% 90.63 ± 6.01%

Under the sample disturbance of five-fold cross-validation, we carried out three different kinds of composite function disturbances separately to screen features in the training dataset and repeated the process 100 times. The retained features were incorporated into the SVM model and RF model each time, and we then calculated the models’ classification performance in the validation dataset and test dataset separately. The measures are presented as mean ± standard deviation. SVM, support vector machine; RF, random forest; ACC, accuracy; SEN, sensitivity; SPE, specificity; Lasso, least absolute shrinkage and selection operator; mRMR, max-relevance and min-redundancy.