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. 2020 Dec 9;9:e64007. doi: 10.7554/eLife.64007

Figure 4. Genetically increasing casein kinase I (CKI) levels or activity rescues the Δprd-2 long period phenotype.

Figure 4.

Representative race tubes (RTs) from ras-1bd Pqa-2-ck-1a single (pink) and ras-1bd Pqa-2-ck-1a Δprd-2 double (yellow) mutants are shown with growth using the indicated concentrations of quinic acid (QA) to drive expression of ck-1a. All results are shown in a scatterplot, where each dot represents one RT’s free running period length. ras-1bd controls (black) had an average period of 22.5 ± 0.5 hr (N = 12), and period length was not significantly affected by QA concentration (ANOVA p=0.297). ras-1bd Δprd-2 controls (blue) had an average period of 25.4 ± 0.4 hr (N = 10), and period length was not significantly affected by QA concentration (ANOVA p=0.093). Period length of ras-1bd Pqa-2-ck-1a single mutants (pink) was significantly altered across QA levels (ANOVA p=3.6 × 10−6), and the average period at 10−1 M QA was 24.3 ± 0.5 hr (N = 4). Period length of ras-1bd Pqa-2-ck-1a Δprd-2 double mutants (yellow) was also significantly affected by QA levels (ANOVA p=8.1 × 10−8), and the average period at 10−1 M QA was 25.4 ± 0.4 hr (N = 4). The double mutant period length was not genetically additive at high levels of QA induction (A). A hyperactive CKI allele was constructed by expressing the shortest isoform only (CKISHORT). 96-well plate luciferase assays were used to measure the circadian period length. Traces represent the average of three technical replicates across four biological replicate experiments for: ras-1bd controls (gray, τ = 21.7 ± 0.3 hr), ras-1bd Δprd-2 (blue, τ = 25.7 ± 0.6 hr), ras-1bd CKISHORT (pink, τ = 17.4 ± 0.3 hr), and ras-1bd CKISHORT Δprd-2 double mutants (yellow, τ = 18.2 ± 0.3). CKISHORT is completely epistatic to Δprd-2 in double mutants (B).