Table 1.
Ranking of candidate reference genes.
geNorm Ranking |
Developmental stage | Tissue | ||||
---|---|---|---|---|---|---|
Gene name | M-value | Gene name | M-value | |||
1 | αTUB | 0.300 | ACT | 0.892 | ||
2 | GAPDH | 0.307 | UBC | 0.991 | ||
3 | HSP70 | 0.316 | αTUB | 1.018 | ||
4 | ACT | 0.329 | HSP70 | 1.038 | ||
5 | UBC | 0.371 | EF1α | 1.043 | ||
6 | RPS18 | 0.387 | RPS18 | 1.123 | ||
7 | ATPase | 0.408 | GAPDH | 1.144 | ||
8 | EF1α | 0.453 | ATPase | 1.599 | ||
9 | HSP60 | 0.551 | HSP60 | 1.630 | ||
10 | GST | 0.717 | GST | 1.709 |
BestKeeper Ranking |
Developmental stage | Tissue | ||||
---|---|---|---|---|---|---|
Gene name | SD | [r] | Gene name | SD | [r] | |
1 | GAPDH | 0.37 | 0.977 | RPS18 | 0.56 | 0.975 |
2 | αTUB | 0.40 | 0.984 | GAPDH | 0.74 | 0.959 |
3 | ACT | 0.43 | 0.999 | ATPase | 0.91 | 0.889 |
4 | HSP70 | 0.45 | 0.996 | UBC | 0.96 | 0.981 |
5 | UBC | 0.31 | 0.893 | ACT | 0.99 | 0.995 |
6 | EF1α | 0.47 | 0.898 | EF1α | 1.03 | 0.982 |
7 | RPS18 | 1.24 | 0.977 | HSP70 | 1.14 | 0.984 |
8 | ATPase | 0.51 | 0.043 | αTUB | 1.19 | 0.988 |
9 | GST | 0.59 | 0.598 | HSP60 | 1.98 | 0.987 |
10 | HSP60 | 0.66 | 0.772 | GST | 1.52 | 0.837 |
Normfinder Ranking |
Developmental stage | Tissue | ||||
---|---|---|---|---|---|---|
Gene name | Stability Value | Gene name | Stability Value | |||
1 | GAPDH | 0.036 | EF1α | 0.145 | ||
2 | αTUB | 0.038 | ACT | 0.166 | ||
3 | HSP70 | 0.088 | HSP70 | 0.190 | ||
4 | ACT | 0.145 | UBC | 0.206 | ||
5 | UBC | 0.230 | αTUB | 0.212 | ||
6 | RPS18 | 0.231 | RPS18 | 0.492 | ||
7 | EF1α | 0.236 | GAPDH | 0.598 | ||
8 | ATPase | 0.238 | ATPase | 0.813 | ||
9 | HSP60 | 0.258 | HSP60 | 0.816 | ||
10 | GST | 0.491 | GST | 1.235 |
Comparative ΔCt Ranking |
Developmental stage | Tissue | ||||
---|---|---|---|---|---|---|
Gene name | Stability Value | Gene name | Stability Value | |||
1 | ACT | 0.46 | ACT | 0.90 | ||
2 | HSP70 | 0.46 | UBC | 1.00 | ||
3 | αTUB | 0.46 | αTUB | 1.02 | ||
4 | GAPDH | 0.47 | HSP70 | 1.04 | ||
5 | UBC | 0.57 | EF1α | 1.04 | ||
6 | EF1α | 0.57 | RPS18 | 1.13 | ||
7 | HSP60 | 0.70 | GAPDH | 1.15 | ||
8 | GST | 0.87 | ATPase | 1.60 | ||
9 | ATPase | 1.08 | HSP60 | 1.67 | ||
10 | RPS18 | 1.26 | GST | 1.71 |
The bold indicates the gene expression is unstable under specific experimental conditions.