Table 2.
CpG | CHR | MAPINFO | Mean control | Mean MS | δετλα beta | P-value | Gene | CpGs in DMR | Feature | cgi |
---|---|---|---|---|---|---|---|---|---|---|
cg02267270 | 6 | 37,616,410 | 0.42 | 0.53 | 0.11 | 0.01 | MDGA1 | 4 | Body | Island |
cg14926196 | 6 | 37,616,482 | 0.33 | 0.51 | 0.18 | 0.00 | MDGA1 | 4 | Body | Island |
cg20053110 | 6 | 37,617,864 | 0.53 | 0.64 | 0.11 | 0.04 | MDGA1 | 4 | Body | Island |
cg24796644 | 6 | 37,617,956 | 0.57 | 0.70 | 0.13 | 0.01 | MDGA1 | 4 | Body | Island |
cg23299919 | 7 | 157,406,096 | 0.19 | 0.30 | 0.11 | 0.01 | PTPRN2 | 3 | Body | Island |
cg06715136 | 7 | 158,046,025 | 0.73 | 0.83 | 0.11 | 0.02 | PTPRN2 | 3 | Body | Opensea |
cg09756125 | 7 | 158,250,978 | 0.66 | 0.53 | − 0.14 | 0.02 | PTPRN2 | 3 | Body | Shore |
*cg18200810 | 13 | 47,472,200 | 0.60 | 0.48 | − 0.11 | 0.02 | HTR2A | 3 | TSS1500 | Opensea |
*cg24118521 | 13 | 47,472,330 | 0.74 | 0.58 | − 0.16 | 0.02 | HTR2A | 3 | TSS1500 | Opensea |
*cg23881368 | 13 | 47,472,343 | 0.68 | 0.55 | − 0.13 | 0.01 | HTR2A | 3 | TSS1500 | Opensea |
cg07075026 | 17 | 47,091,521 | 0.48 | 0.38 | − 0.10 | 0.01 | IGF2BP1 | 3 | Body | Island |
cg10950924 | 17 | 47,092,072 | 0.56 | 0.46 | − 0.10 | 0.00 | IGF2BP1 | 3 | Body | Island |
cg18128536 | 17 | 47,092,178 | 0.59 | 0.48 | − 0.11 | 0.00 | IGF2BP1 | 3 | Body | Island |
cg12099423 | 20 | 61,590,751 | 0.26 | 0.36 | 0.11 | 0.00 | SLC17A9 | 3 | Body | Shore |
*cg17221813 | 20 | 61,590,823 | 0.38 | 0.51 | 0.13 | 0.00 | SLC17A9 | 3 | Body | Island |
*cg19142181 | 20 | 61,591,066 | 0.37 | 0.54 | 0.17 | 0.00 | SLC17A9 | 3 | Body | Island |
*cg07673080 | 2 | 240,241,154 | 0.89 | 0.76 | − 0.12 | 0.00 | HDAC4 | 2 | Body | Opensea |
*cg10639368 | 2 | 240,241,218 | 0.80 | 0.70 | − 0.11 | 0.00 | HDAC4 | 2 | Body | Opensea |
cg18850127 | 7 | 39,170,497 | 0.65 | 0.51 | − 0.14 | 0.01 | POU6F2 | 2 | Body | Opensea |
cg20302533 | 7 | 39,170,763 | 0.56 | 0.42 | − 0.14 | 0.00 | POU6F2 | 2 | Body | Opensea |
cg06238316 | 19 | 21,265,364 | 0.22 | 0.37 | 0.15 | 0.00 | ZNF714 | 2 | 5′UTR | Island |
cg09352518 | 19 | 21,265,421 | 0.24 | 0.44 | 0.20 | 0.00 | ZNF714 | 2 | 5′UTR | Island |
cg17099656 | 22 | 47,135,171 | 0.17 | 0.30 | 0.13 | 0.00 | CERK | 2 | TSS1500 | Opensea |
cg16154810 | 22 | 47,135,258 | 0.35 | 0.55 | 0.20 | 0.00 | CERK | 2 | TSS1500 | Opensea |