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. 2020 Nov 24;14(11):e0008796. doi: 10.1371/journal.pntd.0008796

Fig 5. Comparison of the plasmid and prophage repertoires of S. Typhimurium ST313 variants.

Fig 5

The presence and absence of Salmonella prophages BTP1, Gifsy-2 ST64B, Gifsy-1 and BTP5 and Salmonella plasmids pSLT-BT, pBT1, pBT2 and pBT3 are shown on three variants of S. Typhimurium ST313. Grey indicates similarity above 95% to African ST313 lineage 2 reference genome D23580. Red indicates absence compared to African ST313 lineage 2 reference genome D23580. The red rectangle on plasmid pSLT-BT represents the multidrug resistance cassette which is present in African ST313 lineage 2, but absent from UK-ST313 and the pig-derived ST313 isolates FD01844610 and FD01844641.