Table 3.
List of ARD regions in close vicinity or overlapping in the three samples
| Chr | S1 | S2 | S3 | Genes in the region |
|---|---|---|---|---|
| 3 |
19,346,924-21,139,827 & 22,281,850-24,847,672 (14) |
19,698,060-20,410,463 & 24,847,578-24,911,195 (7) |
20,623,640-21,407,898 (5) |
GTF3C1, NSMCE1, ERN2, PALB2, NDUFAB1 a , EARS2, GGA2, COG7, ENSSSCG00000031197, USP31, IGSF6, CDR2a, PDZD9, CRYM, ZP2 |
| 7 |
116,030,235-117,205,191 (4) |
117,052,038-117,122,913 (5) |
116,439,959-118,289,816 (7) |
RF00322, GLRX5, RF02192, RF02193, TCL1B, C14orf132, BDKRB2, BDKRB1, GSK3B a , AK7, PAPOLA a , VRK1 |
| 11 |
20,080,154-20,761,357 (5) |
20,283,123-20,824,460 (4) |
21,085,554-21,441,712 (3) |
HTR2A, ESD, RUBCNL, LCP1, ENSSSCG00000034648, CPB2, ZC3H13 |
| 14 |
55,926,799-57,746,832 (9) |
54,287,808-55,764,609 (6) |
54,474,132-57,200,642 (11) |
RF00001, RF00019, HEATR1, ERO1B, NID1, LYST, GNG4, RF00026, B3GALNT2, ARID4B, RF00425, TOMM20 a , RF00397, IRF2BP2, TARBP1, RF00026, PCNX2 |
Columns 2, 3 and 4 indicate the ARD genomic intervals for each sample (S1, S2 and S3, respectively). The number of ARD SNPs representing these intervals in each sample is indicated between brackets. Chr: chromosome; S: sample.
a
Gene name from orthologous genes.