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. 2020 Dec 21;9(12):giaa147. doi: 10.1093/gigascience/giaa147

Figure 6:

Figure 6:

The architecture and components of SABER. Tools, workflows, and parameters for individual use cases (optimization, deployment) are captured in a file structure using standardized CWL specifications and configuration files. The core of the framework (called CONDUIT) is run locally in a Docker container. CONDUIT consists of scripts to orchestrate deployment and optimization, a custom CWL parser, Apache Airflow for workflow execution, and tools to collect and visualize results. Containerized tools are executed locally or using AWS Batch for a scalable solution. The bossDB provides a solution for scalable storage of imaging data, and a local database is used for storing parameters and derived information. JSON: JavaScript Object Notation.