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. 2020 Dec 21;15(12):e0244227. doi: 10.1371/journal.pone.0244227

Fig 4. Ridom™ SeqSphere+ cgMLST analysis minimum spanning tree.

Fig 4

Minimum spanning tree of all isolates based on the Ridom™ SeqSphere+ core genome multilocus sequencing typing (cgMLST) scheme version 2 (2147 genes) and MLST scheme (7 genes) with numbers of allelic differences shown on connecting lines (distances not to scale), ignoring missing alleles. Year of isolation is presented after the isolate’s name, nodes are coloured according to the isolation source, and genetically closely related isolates (≤6 cgMLST alleles differing) are shaded grey.