FIGURE 6.

The performance of haplovalidate is robust to fluctuations in population size. 100 sweep simulations with 32 targets were performed with constant population size or containing a bottleneck which reduces the initial population size to 20% or 10% for 10 generations. (a) True‐positive rate (all identified selection targets), (b) fraction of identified single targets of selection, (c) fraction of selected targets sharing a haplotype block, (d) average fraction of selection targets per haplotype block, (e) false‐positive rate, (f) median effective population size. Dashed line represents the marginal median across simulations with different population sizes [Colour figure can be viewed at wileyonlinelibrary.com]