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. Author manuscript; available in PMC: 2021 Nov 1.
Published in final edited form as: Genet Epidemiol. 2020 Aug 30;44(8):908–923. doi: 10.1002/gepi.22351

Table 2.

Empirical type I error rates of MAGEE tests for 100,000 unrelated individuals at significance levels of 0.05, 1.0 × 10−4, and 2.5 × 10−6.

Quantitative trait
Significance Level		 Binary trait
Significance Level
Test 0.05 1.0 × 10−4 2.5 × 10−6 0.05 1.0 × 10−4 2.5 × 10−6
MV 0.050 1.00 × 10−4 2.74 × 10−6 0.050 1.02 × 10−4 2.35 × 10−6
MF 0.050 1.01 × 10−4 2.49 × 10−6 0.050 1.00 × 10−4 2.84 × 10−6
IV 0.050 1.04 × 10−4 2.47 × 10−6 0.050 1.01 × 10−4 2.31 × 10−6
IF 0.050 1.01 × 10−4 2.70 × 10−6 0.050 9.93 × 10−5 2.14 × 10−6
JV 0.050 1.02 × 10−4 2.51 × 10−6 0.050 1.01 × 10−4 2.44 × 10−6
JF 0.050 1.00 × 10−4 2.55 × 10−6 0.050 1.02 × 10−4 2.59 × 10−6
JD 0.050 1.00 × 10−4 2.53 × 10−6 0.050 1.01 × 10−4 2.40 × 10−6