Anchor point |
A node in a molecular network, whose formal identification is based on NMR after targeted isolation or by comparison of two independent and orthogonal data with a pure standard (i.e., retention time and m/z) (level 1 identification according to the Metabolomic Standard Initiative (MSI) (Sumner et al., 2007) |
Bar chromatogram |
A bar plot reconstituted from peak descriptors obtained after LC-HRMS data processing. The peak height is represented in bar form, as a function of retention time. The chromatographic peak is thus represented in a centroid way. This depiction allows simplifying the original chromatogram and focusing on the intensity and mean retention time of the peaks |
Cluster specificity percentage |
In a FBMN, average of the specificity percentages of the features grouped in a cluster for a given herb |
Component |
A chemical compound, also called chemical constituent, specialized or secondary metabolite, or natural product |
Feature-based molecular network (FBMN) |
Incorporation of LCMS features information (m/z, retention time, intensity) in the molecular networking of MS/MS spectra. It allows, among others, to distinguish isomers and to integrate relative quantitative information. In a FBMN, a feature is equivalent to a node (Nothias et al., 2020) |
Formula |
A combination of several TCM herbs (Pei et al., 2013) |
Marker |
A defined chemical compound for an herbal material utilized for control purposes (WHO, 2007) |
Multi-component signature |
A series of analogue components that are specific to one herb in a formula |
Specificity percentage |
Relative height intensity of one feature in a multi-herb formula. The peak height of one aligned feature in one herb is divided by the sum of the heights in all herbs |