TABLE 4.
References | Ideology | Gene Selection Algorithm | Classifier | Dataset | Performance Evaluation Metrics |
Zare et al., 2019 | Addresses the linear independence to find informative features with the help of matrix factorization and SVD. | Matrix Factorization based on SVD | Naïve Bayes, C4.5, and SVM | • Brain • CNS • Colon • DLBCL • GLI • Ovarian • SMK • Breast • Prostrate |
• Cross-Validation (5-Fold and DOB-SCV) • Sensitivity • Specificity • Accuracy • G-Mean |
Chinnaswamy and Srinivasan, 2016 | The correlation coefficient is used as the attribute evaluator and PSO as a search strategy to select the necessary features. | Correlation Coefficient and PSO | ELM, J48, Random Forest, Random Tree, Decision Stump, and Genetic Programming | • SRBCT • Lymphoma • MLL |
• Classifier Accuracy |
Alshamlan et al., 2015 | The Genetic Bee Colony combines the benefits of the Genetic Algorithm and Artificial Bee Colony. The method is evaluated using SVM. | Genetic Bee Colony | SVM | • Colon • Leukemia • Lung • SRBCT • Lymphoma |
• Classification Accuracy • LOOCV |
Liao et al., 2014 | Two-stage feature selection methods involve the Laplacian Score and wrapper approach (SFS and SBS) to select the superior genes. Also, it considers the variance information. | Locality Sensitive Laplacian Score, Sequential Forward Selection and Sequential Backward Selection | SVM | • Acute Lymphoma • Lung Cancer • DLBCL • Prostrate • MLL Leukemia • SRBCT |
• Accuracy • Precision • Recall • F-Score • AUROC |
Shukla et al., 2018 | This hybrid method targets at improving the classification accuracy with a two-stage method. It comprises the EGS (multi-layer and F-Score approach) as the first stage to reduce the noise and redundant features; in the second stage, AGA is used as a wrapper to select the informative genes used SVM and NB as fitness functions. | Multi-Layer Ensemble Gene Selection (EGS) and Adaptive Genetic Algorithm (AGA) | SVM and Naïve Bayes | • Breast • Colon • DLBCL • SBRCT • Lung • Leukemia |
• Accuracy • FMeasure • Sensitivity |
Sun et al., 2019a | A hybrid gene selection method combining the ReliefF and the Ant Colony Optimization is proposed. It is a filter-wrapper based gene selection. | ReliefF-Ant Colony Optimization | RFACO-GS | • Colon • Leukemia • Lung • Prostrate |
• Classification Accuracy |