TABLE 5.
Linkage markers associated with CMV-resistant in Capsicum.
| Genetic population | Resistant loci | Chromosome/Linkage group | Marker type | Marker name | Marker size (bp) | Map location (cM) | CMV strains | References |
| Maor × Perennial | cmv11.1 | LG11/Chr. 11 | AFLP | E35/M48-101 | 101 | – | CMV-V27 | Chaim et al., 2001a |
| cmv13.1 | LG13 | RAPD | OPP11500 | 500 | – | |||
| cmv6.1 | LG6 | RAPD | OPA121700 | 1700 | – | |||
| cmv4.1 | LG4 | AFLP | E48/M49-270 | 270 | – | |||
| H3 × Vania | cmv12.1 | Chr. 12 | AFLP | E33/M48-132 | 132 | – | CMV-MES and CMV-N | Caranta et al., 2002 |
| cmv11.1 | Chr. 11 | L | – | – | CMV-N | |||
| cmv11.2 | Chr. 11 | P14/M59-137 | 137 | CMV-N | ||||
| cmv5.1 | Chr. 5 | E35/M48-475 | 475 | CMV-N | ||||
| VC16a × SS69 | - | – | ISSR | I-34450 | 450 | 27.3 | - | Wang et al., 2009 |
| Bukang × Jeju | Cmr1 | Chr.2 | SNP | CaTm-int3HRM | 158 | 2 | CMVKorean, CMVFNY and CMVP1 | Kang et al., 2010 |
| CaT1616BAC | 200 | 2 | ||||||
| 240H02sp6 | 472 | 2 | ||||||
| BJ0747-1-3-1-1 × XJ0630-2-1-2-1-1 | qcmv.hb-4.1 | LG4 | ISSR | UBC843 | – | CMV-HB | Yao et al., 2013 | |
| qcmv.hb-8.2 | LG8 | ISSR | UBC829 | – | ||||
| BJ0747-1-3-1-1 × XJ0630-2-1-2-1-1 | qcmv11.1 | Chr. 11 | SNP | Marker6201026 | – | – | CMVHB–zj | Li N. et al., 2018 |
| qcmv11.2 | Chr. 11 | Marker5409028 | – | – | ||||
| qcmv12.1 | Chr. 12 | Marker17652010 | – | – | ||||
| Q132 × FS871 | cr | – | SSR | GI1354, genSSR3000 | – – | 1.3 0.3 | – | Zhang et al., 2016 |
| Perennial × 83-58 | CMV12.3 | Chr. 12 | KASP | UN54228_1146 | – | 1.8 | – | Wang, 2016 |
| PBC688 × G29 | qCmv2.1 | Chr. 2 | Indel | Indel2-134 | 230 | 0.3 | CMVFNY | Guo et al., 2017 |
| I7339 × E1338 | cmr3E, cmr3L | – | RAPD | OPAT-16 | 22.3 20.7 | CMVP1 | Min et al., 2014 | |
| A1 × 2602 | cmvP1-5.1 | Chr. 5 | SNP | SNP13525, SNP13624 | – | – | CMVP1 | Min et al., 2016 |
| cmvP1-10.1 | Chr. 10 | SNP | SNP07415, SNP07478 | – | – | |||
| Lam32 × Jeju | cmr2 | Chr. 8 | KASP | Affy4 | – | 2.3 | CMVKorean and CMVFNY | Choi et al., 2018 |
Chr., chromosome; LG, linkage group; AFLP, amplified fragment length polymorphism; RAPD, random amplified polymorphic DNA; ISSR, inter-simple sequence repeat; SNP, single nucleotide polymorphism; CAPS, cleaved amplified polymorphic sequence; SSR, simple sequence repeat; KASP, kompetitive allele-specific PCR; Indel, insertion-deletion.