Table 3.
Candidate genes found in the identified interval.
| Gene Names | Positions on Aradu.A07 (bp) | Descriptions |
|---|---|---|
| Aradu.WGI5L | 1144973 to 1150960 | ATP binding; GTP binding; nucleotide binding; nucleoside-triphosphatases; IPR000767 (Disease resistance protein), IPR027417 (P-loop containing nucleoside triphosphate hydrolase); GO:0000166 (nucleotide binding), GO:0006952 (defence response), GO:0017111 (nucleoside-triphosphatase activity), GO:0043531 (ADP binding) |
| Aradu.870BG | 1153343 to 1155460 | DnaJ homolog subfamily B member 14-like [Glycine max]; IPR001623 (DnaJ domain), IPR024593 (Domain of unknown function DUF3444) |
| Aradu.RLZ61 | 1159085 to 1159567 | F-box family protein; IPR001810 (F-box domain); GO:0005515 (protein binding) |
| Aradu.SFU0J | 1178336 to 1181460 | Phytochromobilin:ferredoxin oxidoreductase, chloroplastic-like isoform X2 [Glycine max]; IPR009249 (Ferredoxin-dependent bilin reductase); GO:0010024 (phytochromobilin biosynthetic process), GO:0050897 (cobalt ion binding), GO:0055114 (oxidation-reduction process) |
| Aradu.DN3DB | 1190431 to 1194331 | Transcriptional regulator STERILE APETALA-like [Glycine max]; IPR015943 (WD40/YVTN repeat-like-containing domain); GO:0005515 (protein binding) |
| Aradu.BD60N | 1202798 to 1205874 | Glucose-1-phosphate adenylyltransferase family protein; IPR011831 (Glucose-1-phosphate adenylyltransferase); GO:0005978 (glycogen biosynthetic process), GO:0008878 (glucose-1-phosphate adenylyltransferase activity), GO:0009058 (biosynthetic process), GO:0016779 (nucleotidyltransferase activity) |
| Aradu.8G9XJ | 1210713 to 1215639 | Phosphopyruvate hydratase; IPR000941 (Enolase); GO:0000015 (phosphopyruvate hydratase complex), GO:0000287 (magnesium ion binding), GO:0004634 (phosphopyruvate hydratase activity), GO:0006096 (glycolysis) |
| Aradu.2V08S | 1216357 to 1220881 | Neutral ceramidase-like isoform 1 [Glycine max]; IPR006823 (Neutral/alkaline nonlysosomal ceramidase) |
| Aradu.188J4 | 1225601 to 1228083 | ATP-dependent DNA helicase, putative n = 7 Tax = Trypanosomatidae RepID = E9BR42_LEIDB; IPR010339 (TIP49, C-terminal), IPR027238 (RuvB-like), IPR027417 (P-loop containing nucleoside triphosphate hydrolase); GO:0000166 (nucleotide binding), GO:0003678 (DNA helicase activity), GO:0005524 (ATP binding), GO:0017111 (nucleoside-triphosphatase activity), GO:0043141 (ATP-dependent 5’-3’ DNA helicase activity) |
| Aradu.X1L7N | 1229461 to 1233773 | Armadillo repeat-containing protein 8-like [Glycine max]; IPR016024 (Armadillo-type fold); GO:0005488 (binding), GO:0005515 (protein binding) |
| Aradu.CH4M9 | 1233738 to 1235758 | Chaperonin-like RbcX protein; IPR003435 (Chaperonin-like RbcX) |
| Aradu.8247R | 1242781 to 1253120 | LRR and NB-ARC domain disease resistance protein; IPR000767 (Disease resistance protein), IPR013057 (Amino acid transporter, transmembrane), IPR025875 (Leucine rich repeat 4), IPR027417 (P-loop containing nucleoside triphosphate hydrolase); GO:0006952 (defense response), GO:0043531 (ADP binding) |
| Aradu.1K902 | 1254064 to 1256589 | Transmembrane amino acid transporter family protein; IPR013057 (Amino acid transporter, transmembrane) |
| Aradu.J21RS | 1258934 to 1263681 | Transmembrane amino acid transporter family protein; IPR001854 (Ribosomal protein L29), IPR010729 (Ribosomal protein L47, mitochondrial), IPR013057 (Amino acid transporter, transmembrane); GO:0003735 (structural constituent of ribosome), GO:0005622 (intracellular), GO:0005761 (mitochondrial ribosome), GO:0005840 (ribosome), GO:0006412 (translation) |
| Aradu.PWJ6Q | 1269328 to 1270490 | Amino acid permease 7; IPR013057 (Amino acid transporter, transmembrane) |
| Aradu.G4PX6 | 1275878 to 1279624 | Probable galactinol--sucrose galactosyltransferase 2-like isoform X1 [Glycine max]; IPR008811 (Glycosyl hydrolases 36), IPR013785 (Aldolase-type TIM barrel); GO:0003824 (catalytic activity) |
| Aradu.WDU9W | 1283093 to 1284551 | Class III homeobox-leucine zipper protein n = 2 Tax = Asparagus RepID = I0IUI4_9ASPA; IPR013978 (MEKHLA) |
| Aradu.3FH81 | 1292398 to 1292610 | Transmembrane protein, putative |
| Aradu.FX37I | 1294555 to 1304080 | BTB/POZ domain-containing protein; IPR011333 (BTB/POZ fold); GO:0005515 (protein binding) |
| Aradu.XJ0L1 | 1305965 to 1306534 | BTB/POZ domain-containing protein; IPR011333 (BTB/POZ fold); GO:0005515 (protein binding) |
| Aradu.XLV7R | 1311374 to 1312674 | Heavy metal transport/detoxification superfamily protein, putative n = 1 Tax = Theobroma cacao RepID = UPI00042B042A |
| Aradu.JRV68 | 1314901 to1315584 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; IPR004864 (Late embryogenesis abundant protein, LEA-14) |