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. 2020 Dec 1;12(12):1376. doi: 10.3390/v12121376

Figure 2.

Figure 2

Phylogenetic analysis of the predicted RNA-dependent RNA polymerase amino acid sequences encoded by contigs assembled from soybean thrips RNA-seq data (indicated in bold) and related viruses in the order Picornavirales. Predicted amino acid sequences containing RNA-dependent RNA polymerase domains were aligned using MUSCLE. Phylogenetic analyses were performed using the maximum likelihood method in MEGA7. Numbers at nodes indicate percent bootstrap support (500 replicates). Nodes with less than 50% bootstrap support were collapsed to the next higher level. GenBank accession numbers are indicated after each sequence name.