Table 3.
Distribution of plasmid replicons identified among 31 whole genome sequenced K.pneumoniae and K. variicola isolates by PlasmidFinder database.
| K. pneumoniae | K. variicola | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Replicon | ST147 ** | ST15 | ST461 | ST1079 | ST29 | ST307 | ST280 | ST34 | ST4197 | Identity/% | N° Isolates/% |
| IncFIA (HI1) | 6 | 7 | 1 | 1 | 1 | 1 | 1 | 94.59–100 | 18/58.1 | ||
| IncFIB (pQil)_1_pQil | 1 * | 1 * | 100 | 02/06.4 | |||||||
| IncFIB (K)_1_Kpn3 | 12 (9 *) | 7 * | 1 | 1 | 1 * | 1 | 1 * | 98.93–100 | 24/77.4 | ||
| IncFIB (pKPHS1) | 14 | 97.32–100 | 14/45.5 | ||||||||
| IncFIB (Mar)_1_pNDM | 1 | 1 | 1 * | 99.77–100 | 03/09.7 | ||||||
| IncFII_1_pKP91 | 10 | 5 | 1 | 1 | 1 | 85.47–88.55 | 18/58.1 | ||||
| IncFII (Yp) | 6 | 5 | 1 | 1 | 1 | 85.71 | 14/45.5 | ||||
| IncFII (pMET)_1_pMET1 | 1 | 98.09 | 01/03,2 | ||||||||
| IncR_1 | 4 (2 *) | 2 * | 1 | 99.2–100 | 07/22.5 | ||||||
| IncN_1 | 16 | 1 | 99.42 | 17/54.8 | |||||||
| IncL/M (pOXA-48) | 1 * | 100 | 01/03.2 | ||||||||
| IncX4_1 | 1 | 99.73 | 01/03.2 | ||||||||
| repA-pKPC-2 | 1 | 99.71 | 01/03.2 | ||||||||
| Col (MG828)1 | 1 | 93.51 | 01/03.2 | ||||||||
| ColRNAI_1 | 4 (2 *) | 6 | 1 | 1 | 1 | 1 | 85.5–100 | 14/45.5 | |||
| ColpVC_1 | 1 | 98.45 | 01/03.2 | ||||||||
* The number followed by * represents the isolates with 100% nucleotide coverage and the identity to reference replicon type. ** number of isolates for STs: ST147-17 isolates; ST15-7 isolates; the remaining 1 isolate each has ST type.