Table 2.
Genetic variability parameters of Rdl full mutation.
| Samples | N | S * | h (Hd) | Syn | NSyn | π (k) | D | F * |
|---|---|---|---|---|---|---|---|---|
| Per Allele | ||||||||
| S | 25 | 11 | 10 (0.90) | 0 | 0 | 0.003 (2.53) | −0.44 ns | −0.53 ns |
| R | 43 | 6 | 6 (0.30) | 1 | 0 | 0.0005 (0.54) | −1.61 ns | −1.65 ns |
| Per locality (altitude in m a.s.l.) |
||||||||
| Tiko (9–70) | 12 | 0 | 1 (0.00) | 0 | 0 | 0 (0.00) | n.a. | n.a. |
| Mutengene (220) | 20 | 9 | 9 (0.85) | 1 | 1 (A296S) | 0.002 (1.97) | −0.76 ns | −0.39 ns |
| Meanja (305) | 20 | 10 | 6 (0.68) | 0 | 1 (A296S) | 0.002 (2.00) | −1.02 ns | 0.04 ns |
| Likoko (800) | 16 | 8 | 7 (0.83) | 0 | 1 (A296S) | 0.002 (2.38) | −0.05 ns | −0.21 ns |
| ALL | 68 | 16 | 16 (0.71) | 1 | 1 | 0.002 (1.85) | −1.32 ns | −1.87 ns |
N = number of sequences (2n); S *, number of polymorphic sites; h, number of haplotypes (Hd = haplotype diversity); Syn, Synonymous mutations; Nsyn, Non-synonymous mutations; π, nucleotide diversity (k = mean number of nucleotide differences); D and F * Tajima’s and Fu and Li’s statistics; ns, not significant; S = susceptible; R = resistant; m a.s.l. = meters above the sea level.