Table 2.
3D structure prediction using the Phyre2 homology protein modeling.
| a/a | Code | NCBI Accession (P) | SOLYC Number | Confidence | Coverage | Template |
|---|---|---|---|---|---|---|
| 1 | SlDEF1 | NP_001234872 | Solyc07g007750.3.1 | 100% | 100% | c2lr3A 1 |
| 2 | SlDEF2a | XP_025886757 | Solyc05g150107.1.1 | 86.3% | 28% | d1f2si 2 |
| 3 | SlDEF2b | XP_019069532 | Solyc05g150107.1.1 | 85.9% | 27% | c1f2sI 2 |
| 4 | SlDEF3 | NP_001315592 | Solyc07g006380.3.1 | 99.9% | 100% | c4uj0B 1 |
| 5 | SlDEF4 | XP_004242838 | Solyc07g009060.4.1 | 96.2% | 83% | c2n2qA 1 |
| 6 | SlDEF5 | XP_010319372 | Solyc04g008470.3.1 | 99.9% | 100% | c2lr3A 1 |
| 7 | SlDEF6 | XP_004242851 | Solyc07g009260.3.1 | 100% | 98% | d1bk8a 1 |
| 8 | SlDEF7 | NP_001297246 | Solyc07g007710.4.1 | 99.9% | 100% | c2lr3A 1 |
| 9 | SlDEF8 | NP_001297247 | Solyc07g007730.4.1 | 100% | 100% | c2lr3A 1 |
| 10 | SlDEF9 | NP_001333453 | Solyc07g007755.1.1 | 100% | 100% | c2lr3A 1 |
1 Defensins/Defensins like proteins, 2 snakins like proteins deposited in Protein Data Bank (PDB; https://www.rcsb.org/). SlDef: Solanum lycopersicum defensin.