Table 1.
Strain ID | Source | Molecular Characteristics | ||||
---|---|---|---|---|---|---|
PCR-Serogroup | ST | CC | SL | cgMLST | ||
46894 | P | IIa | 155 | CC155 | SL155 | CT842 |
46895 | P | IIa | 504 | CC475 | SL475 | CT2943 |
46896 | P | IIa | 121 | CC121 | SL121 | CT1249 |
46897 | P | IIa | 121 | CC121 | SL121 | CT1249 |
46898 | F | IVb | 1 | CC1 | SL1 | CT7225 * |
46899 | F | IIa | 8 | CC8 | SL8 | CT7220 * |
46900 | F | IIa | 8 | CC8 | SL8 | CT777 |
46901 | F | IIa | 8 | CC8 | SL8 | CT777 |
46902 | F | IIa | 8 | CC8 | SL8 | CT777 |
46903 | P | IIa | 121 | CC121 | SL121 | CT893 |
46904 | F | IIa | 121 | CC121 | SL121 | CT7221 * |
46905 | F | IIa | 121 | CC121 | SL121 | CT7221 * |
46906 | F | IIa | 7 | CC7 | SL7 | CT7226 * |
46907 | F | IIa | 121 | CC121 | SL121 | CT7221 * |
46908 | P | IIa | 121 | CC121 | SL121 | CT7223 * |
46909 | P | IIa | 31 | CC31 | SL31 | CT7227 * |
46910 | P | IIa | 121 | CC121 | SL121 | CT7222 * |
46911 | F | Ia | 121 | CC121 | SL121 | CT7221 * |
46912 | F | IIa | 173 | CC19 | SL378 | CT3909 |
46913 | F | IIa | 155 | CC155 | SL155 | CT1170 |
46914 | F | IIa | 155 | CC155 | SL155 | CT1170 |
46915 | F | IIa | 173 | CC19 | SL378 | CT3909 |
46916 | F | IIa | 173 | CC19 | SL378 | CT3909 |
46917 | F | IIa | 121 | CC121 | SL121 | CT7224 * |
46918 | F | IIa | 121 | CC121 | SL121 | CT7224 * |
46919 | F | IIa | 121 | CC121 | SL121 | CT7224 * |
46920 | F | IIa | 121 | CC121 | SL121 | CT7224 * |
46921 | F | IIa | 31 | CC31 | SL31 | CT7227 * |
P, fish production environment; F, RTE fish; ST, sequence type; CC, clonal complex; SL; sublineage; cgMLST, core genome MLST type; * new cgMLST type.