| CID | collision-induced dissociation |
| DCM | dichloromethane |
| EIC | extracted ion chromatogram |
| ESI | electrospray ionization |
| FT-ICR | Fourier-Transform Ion-Cyclotrone-Resonance |
| DIC | N,N-diisopropylcarbodiimide |
| DMF | dimethylformamide |
| DHX | deuterium-hydrogen-exchange |
| GFP | green fluorescence protein |
| HDX | hydrogen-deuterium exchange |
| HPLC | high performance liquid chromatography |
| ITs | ionization tags |
| LB | Luria broth |
| LC | liquid chromatography |
| MRM | multiple reaction monitoring |
| MS | mass spectrometry |
| MS/MS | tandem mass spectrometry |
| NHS | N-hydroxysuccinimide |
| NMR | nuclear magnetic resonance |
| OD | optical density |
| Oct | octyl |
| PAGE | polyacrylamide gel electrophoresis |
| PBS | phosphate-buffered saline |
| QAS | quaternary ammonium salts |
| RP | reverse-phase |
| TEA | triethylamine |
| TEAB | triethylammonium bicarbonate |
| TFA | trifuoroacetic acid |
| TIC | total ion chromatogram |
| TIS | triisopropylsilane |
| TRITC | tetramethylrhodamine-isothiocyanate |