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. 2020 Dec 14;8:593497. doi: 10.3389/fchem.2020.593497

Table 3.

Summarized details of the final shortlisted drug target candidates for dormant Mtb.

Gene ID Gene name Protein name Function Protein length Gene expression status Network properties
Rv2590 fadD9 Probable fatty-acid-CoA ligase FadD9 (Fatty-acid-CoA synthetase) Involved in lipid degradation, specific function unknown 1168 Upregulated two-to four-folds in all dormancy models Neighbors: 4, DEG among neighbors: 1
Rv3515c fadD19 Long-chain-fatty-acid-CoA/3-oxocholest-4-en-26-oate-CoA ligase Involved in the activation of long-chain fatty acids as acyl-coA and cholesterol degradation 548 Upregulated two to seven-folds in all dormancy models Neighbors: 1, DEG among neighbors: 1
Rv1832 gcvB Probable glycine dehydrogenase (decarboxylating) Component of glycine cleavage system, binds to the α-amino group of glycine 941 Upregulated 3-8 folds in 3 dormancy models Neighbors: 18, DEG among neighbors: 9
Rv2780 ald Alanine dehydrogenase Catalyzes reversible reductive amination of pyruvate to L-alanine, functions as a homohexamer 371 Upregulated 4- to 40-folds in 3 dormancy models Neighbors: 105, DEG among neighbors: 39
Rv1994c cmtR HTH-type transcriptional regulator (CmtR) Metal-dependent repression of cmt operon promoter, functions as a homodimer 118 Upregulated 1.5- to 17-folds in all dormancy models Neighbors: 241, DEG among neighbors: 103
Rv0324 Rv0324 Possible transcriptional regulatory protein (Possibly ArsR-family) Possible transcriptional regulator, specific function unknown 226 Upregulated 1.5- to 3-folds in 3 dormancy models Neighbors: 26, DEG among neighbors: 14