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. 2020 Dec 28;21(Suppl 21):534. doi: 10.1186/s12859-020-03885-9

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© The Author(s) 2020

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 3 — Perfect “good” 2D side-view particle selection-based fully automated perfect 2D binary mask generation. a Original side-view particle image that is picked by the DeepCryoPicker [10] using the KLH dataset [12]. b The preprocessed version of the original side-view particle. c Initial binary mask of the b using the IBC clustering algorithm in AutoCryoPicker [13]. d Feret diameter detection of c. e Initial 2D binary mask generation of a. f Postprocessing version of c. g Perfect Feret diameter detection using f. h Perfect binary mask generation