Table 7.
lncRNA-mRNA coexpression network analysis between the confirmed lncRNAs and mRNAs.
| lncRNA seqname | Target mRNA gene symbol | Correlation | P value | FDR |
|---|---|---|---|---|
| ENST00000566954 | WIPF1 | 0.994 | 4.94602E − 07 | 8.08971E − 05 |
| GP6 | 0.995 | 3.76023E − 07 | 6.68503E − 05 | |
| POLRMT | -0.995 | 3.48896E − 07 | 6.68503E − 05 | |
| LRRN4CL | -0.992 | 1.12833E − 06 | 1.39810E − 04 | |
| PLA2G2F | -0.997 | 7.90082E − 08 | 2.30760E − 05 | |
| RBM10 | -0.993 | 9.00992E − 07 | 1.15130E − 05 | |
| C11orf16 | -0.995 | 3.63929E − 07 | 6.68503E − 05 | |
|
| ||||
| ENST00000580897 | C2CD3 | -0.995 | 2.52021E − 07 | 6.06185E − 05 |
| SDHAF3 | 0.996 | 1.51514E − 07 | 3.87212E − 05 | |
| NT5C1A | 0.995 | 2.81966E − 07 | 6.40533E − 05 | |
| DGCR14 | 0.997 | 6.94397E − 08 | 2.18415E − 05 | |
| F12 | 0.999 | 6.96601E − 09 | 4.74734E − 06 | |
| SH2B1 | 0.997 | 5.74742E − 08 | 2.13647E − 05 | |
| PGA5 | 0.994 | 6.64443E − 07 | 9.70324E − 05 | |
| GJB4 | 0.999 | 6.28164E − 13 | 2.56856E − 09 | |
| DNAH1 | 0.998 | 1.46018E − 08 | 7.46336E − 06 | |
| MAP3K10 | 0.993 | 7.86261E − 07 | 1.10216E − 04 | |
| HAUS7 | 0.999 | 1.16229E − 10 | 2.376297E − 07 | |
| TSPAN32 | 0.997 | 4.71800E − 08 | 1.92919E − 05 | |
| SOCS3 | 0.999 | 5.24868E − 09 | 4.29236E − 06 | |
| ESAM | 0.993 | 8.35582E − 07 | 1.10216E − 04 | |
| STK11IP | 0.994 | 5.76505E − 07 | 8.80655E − 05 | |
| DLEU7 | 0.995 | 3.26488E − 07 | 6.68503E − 05 | |
| C17orf89 | 0.994 | 5.81504E − 07 | 8.80655E − 05 | |
| RBM10 | 0.995 | 3.69676E − 07 | 6.68503E − 05 | |
| NPIPA8 | 0.997 | 6.81732E − 08 | 2.18415E − 05 | |
| TAOK2 | 0.999 | 9.00736E − 10 | 1.22770E − 06 | |
| AC079210.1 | 0.993 | 8.29330E − 07 | 1.10216E − 04 | |
| NEUROG1 | 0.997 | 9.99007E − 08 | 2.72329E − 05 | |
| AQP12A | 0.999 | 1.80042E − 09 | 1.84048E − 06 | |
| C11orf16 | 0.995 | 3.97800E − 07 | 6.77752E − 05 | |
| FJX1 | 0.998 | 9.83848E − 09 | 5.74708E − 06 | |
|
| ||||
| T181556 | DPP9-AS1 | 0.992 | 1.28236E − 06 | 1.54223E − 04 |
Note: lncRNA-mRNA network was constructed based on PCC≧0.8; P value ≤ 0.05 and FDR ≤ 1 between the three validated lncRNAs and 165 most highly relevant dysregulated mRNAs. FDR: false discovery rate.