Table 1.
Assembly and validation statistics of two haplotype-resolved genome assemblies
| Haploid assemblies of “Rojo Pasión” | Genome-specific k-mers common with parental WGS | Precision in haplotyping | Size [Mb] | Chromosome scaffolds | Contig N50 [Mb] | N50 [Mb] | Protein-coding genes (total genes) | |
|---|---|---|---|---|---|---|---|---|
| “Currot” | “Orange Red” | |||||||
| “Currot” haplotype | 12,983,934 | 129,874 | 99.1% | 216.0 | 8 | 0.662 | 25.8 | 30,661 (52,472) |
| “Orange Red” haplotype | 81,422 | 16,807,958 | 99.5% | 215.2 | 8 | 0.664 | 25.5 | 30,378 (51,701) |
The eight main chromosome-level scaffolds of each haplotype made up ~ 99% of the respective assembly