Table 1.

Top 20 upregulated lncRNAs under hypoxic condition in both A549 and NCI-H460 cells

Sequence name	Gene symbol	Fold change A549	Fold change H460	RNA length	Chromosome	Strand	Start	End	Source
NR_046420	UPK1A-AS1	21.5191323	38.5241975	813	chr19	–	36158849	36164193	RefSeq
ENST00000522547	RP11-14I17.2	10.6497245	38.3353098	508	chr8	+	26280108	26281445	GENCODE
ENST00000417355	AC114803.3	8.5930288	46.8519287	311	chr2	+	220163723	220168852	GENCODE
ENST00000546523	RP5-1057I20.2	8.384609	8.9300753	353	chr12	+	48223276	48228337	GENCODE
T054705	G012608	7.9549952	26.5872803	1448	chr11	+	10382151	10383599	RNA-seq: Iyer et al., 2015
T203015	G046886	6.8663933	5.958497	1343	chr2	–	173461092	173462435	RNA-seq: Iyer et al., 2015
T036689	G008310	6.8583296	4.7583565	773	chr10	+	6428518	6429558	RNA-seq: Iyer et al., 2015
ENST00000458314	AC078883.3	6.1392631	5.030675	512	chr2	–	173328989	173330750	GENCODE
TCONS_00000467	XLOC_000695	5.9628345	10.5276413	410	chr1	–	8066073	8066784	RNA-seq: Cabili et al., 2011
ENST00000564127	RP11-480I12.10	5.6380716	5.7666391	592	chr1	–	202779365	202779957	GENCODE
NR_015421	LOC154761	5.626012	3.2081902	2579	chr7	–	143509060	143533810	RefSeq
T085710	G019879	4.5601655	9.3665869	998	chr12	–	106740693	106743112	RNA-seq: Iyer et al., 2015
NR_040079	LOC399715	4.3338854	5.1864333	2967	chr10	+	6368506	6377943	RefSeq
NR_026804	KLF3-AS1	4.2354962	6.9351289	2368	chr4	–	38614321	38666249	RefSeq
T336396	G078889	4.1126362	9.7690188	3072	chr7	+	153646863	153654276	RNA-seq: Iyer et al., 2015
NR_024006	LINC00950	3.8685642	7.478096	5245	chr9	+	35860270	35865515	RefSeq
T036645	G008294	3.8119865	3.0235726	590	chr10	+	6296150	6296740	RNA-seq: Iyer et al., 2015
NR_120598	GACAT2	3.7435975	2.183135	835	chr18	–	8695853	8707619	RefSeq
uc001gwt.1	AX747377	3.7160007	2.6729957	2162	chr1	–	201604354	201606516	UCSC_knowngene
ENST00000608142	RP11-1399P15.1	3.6876088	19.1472439	540	chr2	–	87777013	87777553	GENCODE