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. 2020 Dec 16;19:134–144. doi: 10.1016/j.csbj.2020.12.008

Table 1.

Bacteria that are commonly identified in human luminal and mucosa-associated microbiota from various intestinal segments.


Luminal Microbiota



Mucosa-associated Microbiota

Small Intestine Feces Small Intestine Colon
Dudoenum Jejunum Ileum Colon Dudoenum Ileum Colon
Streptococcaceae Streptococcaceae Streptoccoccus Ruminococcaceae Bacillales Lachnospiraceae Lachnospiraceae
Veilonellacaea Veilonellacaea Lactobacilli Blautia Streptococcaceae Bacteroidaceae Bacteroidaceae
Lactobacillaceae Lactobacillaceae Bacteroide Bifidobacteria Veillonellaceae Ruminoccocaceae Ruminoccocaceae
Lachnospiraceae Lachnospiraceae Clostridium Lachnospiraceae Pseudomonadaceae Enterobacteriaceae Enterobacteriaceae
Clostridiaceae Clostridiaceae Fusobacteriaceae Fusobacteriaceae Fusobacteriaceae
Erysipelotrichaceae Erysipelotrichaceae Akkermansia
Pasteurellaceae Pasteurellaceae
Prevotella Prevotella