TABLE 1.
Overview of the genetic mutations found by whole-genome sequencing of mutants resistant to 2CCA-1a
Strain | Nucleotide mutation | Amino acid change | Locus tag | Protein function |
---|---|---|---|---|
BHN848 | A344- | Frameshift-stop codon | SP_0416 | FabT, MarR family transcriptional regulator |
A1601C | D534A | SP_1221 | Type II restriction endonuclease | |
G253- | Frameshift | SP_RS08765 | Glycosyltransferase family 2 protein | |
G992A | G331D | SP_1901 | RNA methyltransferase | |
BHN849 | C2030A | A677E | SP_0498 | YSIRK-type signal peptide-containing protein |
G808T | E270* | SP_0742 | FakB3, DegV family protein | |
BHN850 | T33G | C11W | SP_0742 | FakB3, DegV family protein |
T75C | N25N | SP_1493 | MucBP domain-containing protein | |
A1896491C | Noncoding region | |||
BHN851 | A1094T | D365A | SP_0686 | Bacteriocin-associated integral membrane family protein |
700052–704058; 4,006-bp deletion | SP_0737–SP_0742 | |||
G601T | A201S | SP_1706 | Hypothetical protein | |
G1821T | K607N | SP_1960 | DNA-directed RNA polymerase subunit beta | |
BHN852 | A625T | K209* | SP_0742 | FakB3, DegV family protein |
G127A | E43K | SP_1136 | DnaD domain protein | |
BHN857 | 300–396; 97-bp deletion | SPD_0646 | FakB3, DegV family protein | |
BHN858 | T386A | V129E | SPD_0646 | FakB3, DegV family protein |
T222C | S74S | SPD_0453 | Restriction endonuclease subunit S | |
BHN859 | A226G | K76E | SPD_0379 | FabT, MarR family transcriptional regulator |
C947T | A316V | SPD_0320 | Glycosyltransferase family 1 protein | |
C1169T | A390V | SPD_0709 | DNA gyrase subunit B | |
BHN860 | 300–396; 97-bp deletion | SPD_0646 | FakB3, DegV family protein | |
BHN870 | 665175–666813; 1,638-bp deletion | Frameshift-Stop codon | SPD_0645-SPD_0646 |
Boldface indicates genes or genetic regions affected by mutations in more than one resistant mutant.