Table 2. Distribution (%) of the pfgch1 amplifications (gene DupA-H; promoter DupI-J).
Region | n | Any | A | B | C | D | E | F * | G ** | H *** | I + | I ++ | I +++ | J |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
West Africa | 1254 | 20.3 | - | - | - | - | 0.3 | 0.2 | 0.7 | 0.6 | 4.5 | 4.3 | 9.6 | 0.1 |
Central Africa | 337 | 26.4 | - | - | - | - | 1.8 | - | - | 3.6 | 8.3 | 11.9 | 0.9 | - |
East Africa | 270 | 66.3 | - | - | 1.1 | - | - | - | - | - | 46.3 | 18.5 | 0.4 | - |
Southern Africa | 234 | 87.2 | - | - | - | 0.9 | - | - | - | - | 59.0 | 26.9 | - | 0.4 |
Horn of Africa | 22 | 9.1 | - | 9.1 | - | - | - | - | - | - | - | - | - | - |
Southeast Asia | 1890 | 23.4 | 0.2 | - | 0.1 | - | 14.8 | 5.2 | 3.1 | 0.1 | - | - | - | - |
* GB4, T996;
** KH02;
*** NF54;
+ KE01;
++ KE01/ML01;
+++ ML01;
DupA—H are gene duplications; DupI (3 types) and DupJ are promoter duplications; (n = 107), Colombia (n = 16) and Peru (n = 22) have no amplifications; frequencies greater than 10% are bolded