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. 2020 Dec 31;16(12):e1009268. doi: 10.1371/journal.pgen.1009268

Table 3. Distribution of the pfgch1 amplifications (Dup).

Region Dup * n No. pfdhfr/pfdhps mutations ** Mean/Median [IQR] CQ Resistance *** (%) ARS Resistance **** (%)
West Africa None 999 3.6/4 [3-4] 50.7 -
Prom 232 4.0/4 [4-5] 50.0 -
Gene 23 4.0/4 [3-4.5] 26.1 -
Central Africa None 248 4.3/4 [4-4] 66.5 -
Prom 71 4.2/4 [4-4] 67.6 -
Gene 18 4.8/4 [4-5] 72.2 -
East Africa None 94 4.5/5 [4-5] 34.0 -
Prom 176 5.1/5 [5-6] 35.8 -
Southern Africa None 32 4/5 [4-5] 28.1 -
Prom 202 5.0/5 [5-5] 1.0 -
Horn of Africa None 22 4.8/5 [5-5] 90.9 -
South(east) Asia None 1453 5.9/6 [5-7] 83.7 35.7
Gene 437 6.6/7 [6-7] 91.8 22.2
Oceania None 95 3.6/3 [3-5] 97.9 -
South America None 32 1.9/1 [1-2.25] 100 -

CQ chloroquine; ARS artemisinin; IQR interquartile range;

* Promoter pDupI-J; Gene gDupA-H;

** based on pfdhfr (N51I, C59R, S108N, I164L and S306F) and pfdhps (I431V, S436A, A437G, K540E/K540N, A581G and S613S);

*** based on pfcrt K76T and other mutations (C72S, M74I, N75D/E, A144F, L148I, I194T, A220S, Q271E, A326D/S, I356L/T and R371I) or pfmdr1 N86Y;

**** based on pfkelch13 (F446I, Y493H, P574L, R539T, and C580Y)