Table 1.
Primers used for defense-related genes expression assay
A | ||
---|---|---|
Gene name | Primers (5’ → 3’) | Estimated product size |
Lipoxygenase 2 (lox2) | F: CAA TGA CTT GGG TAA TCC AGA | 950 |
R: CAT GAG TTC TCA ACC AGT GG | ||
Phenylalanine ammonia lyase (pal) | F: ATC AAC ACC CTC CTC CAG GGG TA | 670 |
R: CGG GTT GTC GTT CAC GGA GTT GA | ||
Aspartate aminotransferase (ast) | F: GTG CCC ACA ACC CTA CTG G | 410 |
R: CAG CCA TGC CCT TCA GCT C | ||
Pathogenesis-related protein (pr1) | F: AAA GCT CAA GAT AGC CCA CAA G | 410 |
R: GGC TTC TCG TTC ACA TAA TTC C |
B | ||
---|---|---|
Gene name | Primers (5’ → 3’) | Product size |
Lipoxygenase 2 (lox2) | F: CAT CAA GCT GCC AAG AGG TT | 118 |
R: GCA ACC AAG AAA ATC CGT CT | ||
Phenylalanine ammonia lyase (pal) | F: GAC CTC GTC CCG CTC TCC TAC A | 96 |
R: CTC CAC AGC AGA GAC GTG GTG AC | ||
Aspartate aminotransferase (ast) | F: GCC AGT GGT GAT CCT GAG AG | 133 |
R: GGA TGC TGA GGC AAC CTA CT | ||
Pathogenesis-related protein (pr1) | F: GGT AGA ACC TCT TCT GGG GAT G | 99 |
R: AGT TGC TTC GGT AGT CGT AGT AC | ||
Actin | F: GAC TCA AAT CAT GTT AGA GAC ATT CAA | 114 |
R: GTA CGG CCA CTG GCA TAG A |
(A) Primers used for sequencing of conserved sites of defense-related genes. Primers were designed based on the alignment of cDNA sequences of the monocot species Zea mays, Triticum aestivum, Oryza sativa, and of the dicot model plant Arabidopsis thaliana. (B) Primers used for qRT-PCR