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. 2020 Dec 18;11:565644. doi: 10.3389/fphar.2020.565644

TABLE 1.

Performance metrics for baseline models: fraction of valid molecules, fraction of unique molecules from and molecules.

Model Valid (↑) Unique@1k (↑) Unique@10k (↑)
Train 1.0 1.0 1.0
HMM 0.076 ± 0.0322 0.623 ± 0.1224 0.5671 ± 0.1424
NGram 0.2376 ± 0.0025 0.974 ± 0.0108 0.9217 ± 0.0019
Combinatorial 1.0 ± 0.0 0.9983 ± 0.0015 0.9909 ± 0.0009
CharRNN 0.975 ± 0.026 1.0 ± 0.0 0.999 ± 0.0
VAE 0.977 ± 0.001 1.0 ± 0.0 0.998 ± 0.001
AAE 0.937 ± 0.034 1.0 ± 0.0 0.997 ± 0.002
JTN-VAE 1.0 ± 0.0 1.0 ± 0.0 0.9996 ±0.0003
LatentGAN 0.897 ± 0.002 1.0 ± 0.0 0.997 ± 0.005

Reported (mean ± SD) over three independent model initializations.