Table 1.
Details of ESCC datasets from the GEO and TCGA database
| GSE | Publication | Upregulated DEG | Downregulated DEG | Platform | Sample size |
|---|---|---|---|---|---|
| GSE17351 | Carcinogenesis | 266 | 426 | GPL570 | Tumor: 5 |
| Normal: 5 | |||||
| GSE20347 | BMC Genomics | 69 | 183 | GPL571 | Tumor: 17 |
| Normal: 17 | |||||
| GSE23400 | Clin Cancer Res | 14 | 37 | GPL96 | Tumor: 53 |
| Normal: 53 | |||||
| GSE100942 | Theranostics | 46 | 83 | GPL570 | Tumor: 4 |
| Normal: 4 | |||||
| GSE38129 | BMC Genomics | 74 | 93 | GPL571 | Tumor: 30 |
| Normal: 30 | |||||
| GSE77861 | BMC Cancer | 88 | 123 | GPL570 | Tumor: 7 |
| Normal: 7 | |||||
| TCGA | 1268 | 1383 | IlluminaHiSeq | Tumor: 78 | |
| Normal: 11 |