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. 2021 Jan 3;25(3):1839–1854. doi: 10.1007/s11030-020-10169-0

Table 1.

Score values of the sixteen computationally predicted pharmacological anti-COVID-19-related activities (against SARS-CoV-2 nsps/sps and human sp ACE2) of the target 1,3,4-oxadiazoles (CoViTris2020 and ChloViD2020) and the three reference drugs (remdesivir, ivermectin, and favipiravir), respectively, using COVID-19 Docking Server methodology (the table demonstrates the top docking binding model score value, i.e., the least predicted binding energy value, in kcal/mol for each compound with each target protein)

Classification SARS-CoV-2/Human target protein Top pose score value for docking of nCoV protein targets
Inhibitory binding energies/affinities (kcal/mol)
CoViTris2020 ChloViD2020 Remdesivir Ivermectin
(B1a form)
Favipiravir
Nsps Mpro − 9.50 − 8.20 − 7.70 − 6.50 − 5.40
RdRp (RTP site) − 12.00 − 9.60 − 8.30 − 7.10 − 6.90
RdRp (RNA site) − 9.40 − 7.90 − 7.10 − 6.60 − 6.10
PLpro (dimer) − 10.60 − 9.30 − 8.10 − 6.00 − 5.40
Nsp3 (207-379, AMP site) − 9.70 − 7.70 − 7.10 − 5.90 − 5.40
Nsp3 (207-379, MES site) − 9.90 − 9.90 − 8.40 − 6.40 − 5.50
Helicase (ADP site) − 8.80 − 8.00 − 7.00 − 5.80 − 5.30
Helicase (NCB site) − 9.90 − 8.90 − 7.50 − 6.10 − 5.40
Nsp14 (ExoN) − 8.10 − 7.50 − 7.70 − 5.70 − 4.90
Nsp14 (N7-MTase) − 11.40 − 9.30 − 9.10 − 7.20 − 6.10
Nsp15 (endoribonuclease) − 8.50 − 8.10 − 8.30 − 6.00 − 4.80
Nsp16 (GTA site) − 10.10 − 8.70 − 8.30 − 6.80 − 5.60
Nsp16 (MGP site) − 9.70 − 7.70 − 7.30 − 6.20 − 5.10
Nsp16 (SAM site) − 10.10 − 8.70 − 8.10 − 6.70 − 5.50
Sps N protein (NCB site) − 10.00 − 8.90 − 7.40 − 6.50 − 5.20
Human ACE2 − 10.20 − 9.00 − 7.90 − 6.70 − 5.60