Table 1.
Data summary and comparisons with other databases
| Data item (human) | miRNASNP-v3 | miRNASNP-v2 | PolymiRTS 3.0 | miRdSNP | SomamiR 2.0 | MSDD | dbMTS |
|---|---|---|---|---|---|---|---|
| Number of SNPs on miRNA seed regions | 6229 | 227 | 294 | N.A. | N.A. | N.A. | N.A. |
| Number of SNPs on pre-miRNAs | 46 826 | 2257 | N.A. | N.A. | N.A. | N.A. | N.A. |
| Number of SNPs on 3′UTRs | 7 115 796 | 566 176 | 427 096 | 175 351 | N.A. | N.A. | 5 318 919 |
| Number of DRVs on miRNA seed regions | 809 | N.A. | N.A. | N.A. | 181 | 5 | N.A. |
| Number of DRVs on pre-miRNAs | 4712 | N.A. | N.A. | N.A. | 1779 | 72 | N.A. |
| Number of DRVs on 3′UTRs | 265 697 | N.A. | N.A. | N.A. | 484 428 | 54 | 16 212 |
| Associated with GWAS SNPs | 235 085 | 131 686 | 4830 | 630 | N.A. | N.A. | 1571 |
| Experimental validated miRNA targets | 1 027 355 | 393 936 | 2070 | N.A. | 356 384 | N.A. | N.A. |
| Gain of targets by SNVs in miRNA seed regions | 14 491 855 | 162 441 | N.A. | N.A | N.A. | N.A. | N.A. |
| Loss of targets by SNVs in miRNA seed regions | 13 384 176 | 153 290 | N.A. | N.A | N.A. | N.A. | N.A. |
| Gain of targets by SNVs in 3′UTRs | 35 816 938 | 509 791 | 906 703 | 174 | N.A. | N.A. | N.A. |
| Loss of targets by SNVs in 3′UTRs | 37 427 973 | 445 737 | 923 082 | N.A. | N.A. | N.A. | N.A. |
| Number of mature miRNAs | 2652 | 2042 | 2578 | N.A. | 987 | 182 | 2588 |
| Secondary structure | Yes | Yes | No | No | No | No | No |
| Drug sensitivity | Yes | No | No | No | No | No | No |
| Diseases/Traits information | Yes | No | Yes | Yes | Yes | Yes | Yes |
| INDELs | Yes | Yes | Yes | No | No | No | No |
| miRNA/gene expression | Yes | Yes | No | No | No | No | Yes |
| Year of update | 2020 | 2015 | 2014 | 2012 | 2016 | 2017 | 2020 |
N.A. Not available.
The number of SNP in the table refers to SNPs and INDELs.