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. 2020 Sep 29;49(D1):D1276–D1281. doi: 10.1093/nar/gkaa783

Table 1.

Data summary and comparisons with other databases

Data item (human) miRNASNP-v3 miRNASNP-v2 PolymiRTS 3.0 miRdSNP SomamiR 2.0 MSDD dbMTS
Number of SNPs on miRNA seed regions 6229 227 294 N.A. N.A. N.A. N.A.
Number of SNPs on pre-miRNAs 46 826 2257 N.A. N.A. N.A. N.A. N.A.
Number of SNPs on 3′UTRs 7 115 796 566 176 427 096 175 351 N.A. N.A. 5 318 919
Number of DRVs on miRNA seed regions 809 N.A. N.A. N.A. 181 5 N.A.
Number of DRVs on pre-miRNAs 4712 N.A. N.A. N.A. 1779 72 N.A.
Number of DRVs on 3′UTRs 265 697 N.A. N.A. N.A. 484 428 54 16 212
Associated with GWAS SNPs 235 085 131 686 4830 630 N.A. N.A. 1571
Experimental validated miRNA targets 1 027 355 393 936 2070 N.A. 356 384 N.A. N.A.
Gain of targets by SNVs in miRNA seed regions 14 491 855 162 441 N.A. N.A N.A. N.A. N.A.
Loss of targets by SNVs in miRNA seed regions 13 384 176 153 290 N.A. N.A N.A. N.A. N.A.
Gain of targets by SNVs in 3′UTRs 35 816 938 509 791 906 703 174 N.A. N.A. N.A.
Loss of targets by SNVs in 3′UTRs 37 427 973 445 737 923 082 N.A. N.A. N.A. N.A.
Number of mature miRNAs 2652 2042 2578 N.A. 987 182 2588
Secondary structure Yes Yes No No No No No
Drug sensitivity Yes No No No No No No
Diseases/Traits information Yes No Yes Yes Yes Yes Yes
INDELs Yes Yes Yes No No No No
miRNA/gene expression Yes Yes No No No No Yes
Year of update 2020 2015 2014 2012 2016 2017 2020

N.A. Not available.

The number of SNP in the table refers to SNPs and INDELs.