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. 2020 Dec 8;49(D1):D394–D403. doi: 10.1093/nar/gkaa1106

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© The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 6. — PANTHER now includes PEREGRINE enhancer-gene links data. (A) A screenshot of a gene list page after the user queries the PANTHER system with a list of genes (UniProt IDs in Mapped IDs column). The enhancers associated to each gene are listed in the Enhancer column (red arrow), which is not shown by default but can be added by clicking on a link above the list header (not shown). (B) A screenshot of the PANTHER gene list page when a user submits a VCF file. The coordinates of the variants are listed in the Mapped IDs column. PEREGRINE will map the variants to the enhancers (Enhancer column) as well as the gene(s) that is regulated by the enhancers (Gene ID column).