Table 2.
Pfams with statistically significant differences between butyrivibrio_bin_group and two groups of isolate Butyrivibrio and Pseudobutyrivibrio genomes. Adjusted P-value is Kruskal-Wallis test P-value with FDR controlled at 1% using Benjamini-Hochberg method
| Pfam ID | Pfam definition | Pfam functional category | Mean count, butyrivibrio_bin_group (n = 10) | Mean count enolase_positive_group (n = 46) | Mean count, enolase_negative_group (n = 32) | Adjusted P-value |
|---|---|---|---|---|---|---|
| PF03418 | Germination protease | Sporulation | 1 | 0.021739 | 0 | 6.91E-16 |
| PF03419 | Sporulation factor SpoIIGA | Sporulation | 1 | 0.021739 | 0 | 6.91E-16 |
| PF05580 | SpoIVB peptidase S55 | Sporulation | 1 | 0.021739 | 0 | 6.91E-16 |
| PF06686 | Stage III sporulation protein AC/AD protein family | Sporulation | 2 | 0.043478 | 0 | 6.91E-16 |
| PF06898 | Putative stage IV sporulation protein YqfD | Sporulation | 1.1 | 0.021739 | 0 | 6.91E-16 |
| PF07451 | Stage V sporulation protein AD (SpoVAD) | Sporulation | 1 | 0.021739 | 0 | 6.91E-16 |
| PF07454 | Stage II sporulation protein P (SpoIIP) | Sporulation | 1 | 0.021739 | 0 | 6.91E-16 |
| PF09547 | Stage IV sporulation protein A (spore_IV_A) | Sporulation | 1.1 | 0.021739 | 0 | 6.91E-16 |
| PF09548 | Stage III sporulation protein AB (spore_III_AB) | Sporulation | 1 | 0.021739 | 0 | 6.91E-16 |
| PF09551 | Stage II sporulation protein R (spore_II_R) | Sporulation | 1.2 | 0.021739 | 0 | 6.91E-16 |
| PF09578 | Spore cortex protein YabQ (Spore_YabQ) | Sporulation | 1 | 0.021739 | 0 | 6.91E-16 |
| PF12116 | Stage III sporulation protein D | Sporulation | 1 | 0.021739 | 0 | 6.91E-16 |
| PF12685 | SpoIIIAH-like protein | Sporulation | 1 | 0.021739 | 0 | 6.91E-16 |
| PF03862 | SpoVA protein | Sporulation | 2 | 0.043478 | 0 | 7.68E-16 |
| PF08486 | Stage II sporulation protein | Sporulation | 1.9 | 0.043478 | 0 | 7.68E-16 |
| PF08769 | Sporulation initiation factor Spo0A C terminal | Sporulation | 1.8 | 0.043478 | 0 | 8.61E-16 |
| PF03323 | Bacillus/Clostridium GerA spore germination protein | Sporulation | 0.9 | 0.021739 | 0 | 4.69E-14 |
| PF09581 | Stage III sporulation protein AF (Spore_III_AF) | Sporulation | 1 | 0.021739 | 0 | 4.69E-14 |
| PF11007 | Spore coat associated protein JA (CotJA) | Sporulation | 0.9 | 0.021739 | 0 | 4.69E-14 |
| PF12652 | CotJB protein | Sporulation | 0.9 | 0.021739 | 0 | 4.69E-14 |
| PF15714 | Stage V sporulation protein T C-terminal, transcription factor | Sporulation | 0.9 | 0.021739 | 0 | 4.69E-14 |
| PF12164 | Stage V sporulation protein AA | Sporulation | 0.8 | 0.021739 | 0 | 4.20E-12 |
| PF13782 | Stage V sporulation protein AB | Sporulation | 0.8 | 0.021739 | 0 | 4.20E-12 |
| PF00269 | Small, acid-soluble spore proteins, alpha/beta type | Sporulation | 0.7 | 0.021739 | 0 | 3.13E-10 |
| PF02654 | Cobalamin-5-phosphate synthase | Cobalamin biosynthesis | 0 | 0.978261 | 0.90625 | 3.48E-12 |
| PF07685 | CobB/CobQ-like glutamine amidotransferase domain | Cobalamin biosynthesis | 0 | 1.913043 | 1.75 | 6.14E-10 |
| PF01890 | Cobalamin synthesis G C-terminus | Cobalamin biosynthesis | 0 | 0.934783 | 0.84375 | 4.67E-09 |
| PF02570 | Precorrin-8X methylmutase | Cobalamin biosynthesis | 0 | 0.934783 | 0.84375 | 4.67E-09 |
| PF02571 | Precorrin-6x reductase CbiJ/CobK | Cobalamin biosynthesis | 0 | 0.934783 | 0.84375 | 4.67E-09 |
| PF06180 | Cobalt chelatase (CbiK) | Cobalamin biosynthesis | 0 | 0.934783 | 0.84375 | 4.67E-09 |
| PF11760 | Cobalamin synthesis G N-terminal | Cobalamin biosynthesis | 0 | 0.934783 | 0.84375 | 4.67E-09 |