Table 1.
Sixteen new member databases incorporated into RNAcentral in releases 11–16
| Database | Description | Number of annotated sequences |
|---|---|---|
| 5SrRNAdb | 5SrRNAdb is an information resource for 5S ribosomal RNAs. | 11 415 |
| CRS | Conserved RNA structures (CRS) are structured elements of RNA molecules that are conserved across vertebrate species. | 250 867 |
| CRW | CRW Site provides comparative sequence and structure information for ribosomal, intron and other RNAs. | 948 |
| Ensembl Fungi, Metazoa, Protists | The Ensembl Genomes divisions complement the Ensembl database. | 16 331; 64 237; 5652 |
| GeneCards | GeneCards is a searchable, integrative database that provides comprehensive, user-friendly information on all annotated and predicted human genes. | 250 702 |
| IntAct | IntAct provides a freely available, open source database system and analysis tools for molecular interaction data. All interactions are derived from literature curation or direct user submissions. | 382 |
| LncBase | LncBase is a database of experimentally verified and computationally predicted microRNA targets on lncRNAs. | 1337 |
| LncBook | LncBook is a curated knowledgebase of human lncRNAs. | 268 848 |
| MalaCards | MalaCards integrates manually curated and text-mining sources to associate genes, including ncRNAs, with diseases, and lists the supporting evidence. | 34 087 |
| MirGeneDB | MirGeneDB is a curated microRNA gene database covering 45 metazoan organisms. | 29 681 |
| snoDB | snoDB is an interactive database of human snoRNA sequences, abundance and interactions. | 1984 |
| snoRNA Database | The snoRNA Database is a curated collection of archaeal snoRNAs maintained by the Lowe Lab at UC Santa Cruz. | 727 |
| ZFIN | The Zebrafish Information Network (ZFIN) is the database of genetic and genomic data for the zebrafish as a model organism. | 1060 |
| ZWD | ZWD is a collection of non-coding RNA alignments maintained by Zasha Weinberg. | 47 998 |
| Total: 986 256 |