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. 2020 Nov 12;49(D1):D536–D544. doi: 10.1093/nar/gkaa1034

Figure 2.

Figure 2.

JBrowse-based browser for comparison with JG2 and other genomes. In the figure, a genome browser with the JG2 sequence in the upper row and a genome browser with the GRCh37 sequence in the lower row are shown. The display areas of each genome browser can be changed by dragging the mouse on the genome browser. When the display region of one genome browser is changed, the display region of the other genome browser is automatically updated in conjunction with the other genome browser. Using the select box in the top row of the screen, the reference genome sequences shown in the two genome browsers can be changed. In the top half view of Figure 2, there is a track named ‘minimap2 from JG2.0.0.beta to GRCh37.primary_assembly difference VCF’, where alignment of GRCh37 sequence onto JG2 sequence is shown. In Figure 2, two dark green bars are shown, indicating that there are two deletions in GRCh37 compared with the JG2.