Figure 1.

Computational framework for HeRA database. Blue blocks denote datasets used in this study. RNA-seq, traits and gene expression matrix were collected from GTEx. Enhancer annotation was collected from ENCODE, FANTOM and Roadmap Epigenetics Project. Transcription factors (TFs) were collected from AnimialTFDB, DBD, JASPAR and TF2DNA. Gene annotations were collected from ENSEMBL, GENCODE and UCSC. Red blocks denote processed data, including eRNA expression, traits, regulators and target genes. All processed data are available for downloading.