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. 2020 Dec 21;11:612936. doi: 10.3389/fmicb.2020.612936

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Copyright © 2020 Hammond, Reinsel, Grinstead, Lockhart, Jordan and Mollov.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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(A–C) Maximum Likelihood phylogenetic trees with 1,000 bootstrap replications of: (A), the genomic nucleotide sequences; (B) the Replicase (RdRp) amino acid sequences; and (C) the Coat protein (CP) amino acid sequences. Branches with <50% bootstrap support were collapsed. The GenBank accession number for the genomes are listed following the virus acronym in (A); the RdRp and CP sequences were taken from the genome accessions. Virus abbreviations: AcLV, Aconitum latent virus; AHLV, American hop latent virus; AtrMoV, Atractylodes mottle virus; BlScV, blueberry scorch virus; ButMV, butterbur mosaic virus; CPMMV, cowpea mild mottle virus; CVB, chrysanthemum virus B; CVNV, coleus vein necrosis virus; DVS, Daphne virus S; GarCLV, garlic common latent virus; GLV, Gaillardia latent virus; HCMoV, hydrangea chlorotic mottle virus; HelVS, Helenium virus S; HNNV, Helleborus net necrosis virus; HpLV, hop latent virus; KLV, kalanchoe latent virus; LNRSV, Ligustrum necrotic ringspot virus; LSV, lily symptomless virus; LVA, Ligustrum virus A; MjMV, Mirabilis jalapa mottle virus; NCLV, narcissus common latent virus; NeLV, Nerine latent virus; PeSV, pea streak virus; PhlVB, phlox virus B; PhlVS, phlox virus S; PLV, Passiflora latent virus; PopMV, poplar mosaic virus; PotLV, potato latent virus; PVH, potato virus H; PVM, potato virus M; PVS, potato virus S; SVC, Sambucus virus C; YLV, Yam latent virus. The next-generation sequences of both isolates of HelVS, and both isolates of ButMV from the current studies are included in each tree, and each is marked with an asterisk (^*).