Table 3.
The 21-gene signature in IPF PBMCs
| DLCO | FVC | |||||
|---|---|---|---|---|---|---|
| Gene | miRNAa | SVRb | ρc | ρc | ||
| ABHD10 | hsa-miR-223 | −1.2577 | 0.49 | 5.30×10−4 | 0.46 | 9.89×10−4 |
| ATP2B1 | hsa-miR-144 | −1.2072 | 0.51 | 2.92×10−4 | 0.41 | 4.19×10−3 |
| C1orf52 | hsa-miR-144 | −1.2476 | 0.46 | 1.24×10−3 | 0.49 | 4.49×10−4 |
| DECR1 | hsa-miR-223 | −1.2593 | 0.41 | 3.78×10−3 | 0.46 | 1.06×10−3 |
| DNAJC2 | hsa-miR-144 | −1.3116 | 0.53 | 1.07×10−4 | 0.48 | 5.79×10−4 |
| DST | hsa-miR-144 | −1.3074 | 0.47 | 9.01×10−4 | 0.57 | 2.40×10−5 |
| DUSP10 | hsa-miR-223 | −1.2357 | 0.39 | 6.79×10−3 | 0.42 | 2.95×10−3 |
| EXOSC9 | hsa-miR-144 | −1.2346 | 0.55 | 6.83×10−5 | 0.38 | 7.40×10−3 |
| FBXW7 | hsa-miR-223 | −1.3105 | 0.69 | 7.22×10−8 | 0.40 | 4.82×10−3 |
| HTRA1 | hsa-miR-31 | −1.2449 | −0.60 | 7.89×10−6 | −0.42 | 2.61×10−3 |
| INPP5B | hsa-miR-223 | −1.2291 | 0.40 | 5.70×10−3 | 0.56 | 4.21×10−5 |
| LCP2 | hsa-miR-144 | −1.2774 | 0.56 | 4.12×10−5 | 0.38 | 8.30×10−3 |
| MSI1 | hsa-miR-548e | −1.3278 | −0.56 | 5.11×10−5 | −0.44 | 2.00×10−3 |
| PRKRA | hsa-miR-144 | −1.2368 | 0.48 | 7.11×10−4 | 0.42 | 3.06×10−3 |
| RBMXL2 | hsa-miR-150 | −1.2373 | −0.56 | 4.50×10−5 | −0.42 | 2.96×10−3 |
| REL | hsa-miR-144 | −1.2180 | 0.53 | 1.45×10−4 | 0.42 | 2.90×10−3 |
| SLC35F5 | hsa-miR-144 | −1.2466 | 0.44 | 1.90×10−3 | 0.38 | 8.02×10−3 |
| SUCLG2 | hsa-miR-144 | −1.2016 | 0.53 | 1.17×10−4 | 0.37 | 9.09×10−3 |
| TTC35 | hsa-miR-223 | −1.3046 | 0.44 | 2.16×10−3 | 0.41 | 3.99×10−3 |
| hsa-miR-144 | −1.3256 | |||||
| USP16 | hsa-miR-223 | −1.2207 | 0.45 | 1.32×10−3 | 0.42 | 2.96×10−3 |
| YTHDF2 | hsa-miR-144 | −1.3317 | 0.51 | 2.60×10−4 | 0.46 | 9.80×10−4 |
Silencing miRNAs for the protein-coding genes in 21-gene signature
Abbreviation of mirSVR score, ranking miRNA-mRNA binding
Spearman’s rank correlation coefficient between gene expression level and DLCO/FVC