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. Author manuscript; available in PMC: 2022 Feb 1.
Published in final edited form as: Transl Res. 2020 Jul 22;228:1–12. doi: 10.1016/j.trsl.2020.07.009

Table 3.

The 21-gene signature in IPF PBMCs

DLCO FVC
Gene miRNAa SVRb ρc PDLCOgene ρc PFVCgene
ABHD10 hsa-miR-223 −1.2577 0.49 5.30×10−4 0.46 9.89×10−4
ATP2B1 hsa-miR-144 −1.2072 0.51 2.92×10−4 0.41 4.19×10−3
C1orf52 hsa-miR-144 −1.2476 0.46 1.24×10−3 0.49 4.49×10−4
DECR1 hsa-miR-223 −1.2593 0.41 3.78×10−3 0.46 1.06×10−3
DNAJC2 hsa-miR-144 −1.3116 0.53 1.07×10−4 0.48 5.79×10−4
DST hsa-miR-144 −1.3074 0.47 9.01×10−4 0.57 2.40×10−5
DUSP10 hsa-miR-223 −1.2357 0.39 6.79×10−3 0.42 2.95×10−3
EXOSC9 hsa-miR-144 −1.2346 0.55 6.83×10−5 0.38 7.40×10−3
FBXW7 hsa-miR-223 −1.3105 0.69 7.22×10−8 0.40 4.82×10−3
HTRA1 hsa-miR-31 −1.2449 −0.60 7.89×10−6 −0.42 2.61×10−3
INPP5B hsa-miR-223 −1.2291 0.40 5.70×10−3 0.56 4.21×10−5
LCP2 hsa-miR-144 −1.2774 0.56 4.12×10−5 0.38 8.30×10−3
MSI1 hsa-miR-548e −1.3278 −0.56 5.11×10−5 −0.44 2.00×10−3
PRKRA hsa-miR-144 −1.2368 0.48 7.11×10−4 0.42 3.06×10−3
RBMXL2 hsa-miR-150 −1.2373 −0.56 4.50×10−5 −0.42 2.96×10−3
REL hsa-miR-144 −1.2180 0.53 1.45×10−4 0.42 2.90×10−3
SLC35F5 hsa-miR-144 −1.2466 0.44 1.90×10−3 0.38 8.02×10−3
SUCLG2 hsa-miR-144 −1.2016 0.53 1.17×10−4 0.37 9.09×10−3
TTC35 hsa-miR-223 −1.3046 0.44 2.16×10−3 0.41 3.99×10−3
hsa-miR-144 −1.3256
USP16 hsa-miR-223 −1.2207 0.45 1.32×10−3 0.42 2.96×10−3
YTHDF2 hsa-miR-144 −1.3317 0.51 2.60×10−4 0.46 9.80×10−4
a

Silencing miRNAs for the protein-coding genes in 21-gene signature

b

Abbreviation of mirSVR score, ranking miRNA-mRNA binding

c

Spearman’s rank correlation coefficient between gene expression level and DLCO/FVC