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. 2021 Jan 4;12:65. doi: 10.1038/s41467-020-20240-x

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© The Author(s) 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 3 — a α-diversity (Shannon and Simpson diversity) plot of gene families and pathways. These values were calculated based on gene and pathway relative abundances. b Principal coordinate analysis of Bray-Curtis dissimilarities based on abundances of functional pathways detected in donor and patient stools. Pre-FMT represents stool sample collected before the first FMT. FMT1, FMT2, FMT3, and FMT4 represent stool samples collected after the 1st (day 1-5), 2nd (day 7-13), 3rd (day 15-25) and 4th (day 27-120) FMTs respectively. c Heat map summarizing changes in patient’s gut microbial community function following FMT. Pathways with higher relative abundances are shaded red, whereas pathways with low relative abundances are shaded blue.