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. 2020 Dec 31;2(1):100241. doi: 10.1016/j.xpro.2020.100241
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

pro-Sp-C (rabbit, 1:500) Millipore Cat# AB3786, RRID:AB_91588
T1α (hamster, 1:50) Developmental Studies Hybridoma Bank Cat# 8.1.1, RRID:AB_531893
RFP (rabbit, 1:200) Rockland Immunochemicals Cat# 600-401-379, RRID:AB_1182807AB_2209751
GFP (chicken, 1:500) Aves Laboratories Cat# GFP-1020, RRID:AB_10000240
HopX (mouse, 1:50) Santa Cruz Biotechnology Cat# sc-398703, RRID:AB_2687966
Ager (rat, 1:50) R&D Systems Cat# MAB1179, RRID:AB_2289349
Biotin-EpCAM (CD326, for cell isolation, rat, 1:50) Thermo Fisher Scientific Cat# 13-5791-82, RRID:AB_1659713
CD45 (rat, 42 μg/plate) BioLegend Cat# 103101, RRID:AB_312966
CD32 (rat, 16 μg/plate) BioLegend Cat# 156402, RRID:AB_2783133
Streptavidin Particles Plus – DM (RUO) BD Biosciences Cat# 557812, RRID:AB_10050580

Chemicals, peptides, and recombinant proteins

Tamoxifen Sigma-Aldrich Cat# T5648
Dispase Corning Cat# 354235
JTE-013 Cayman Chemical Cat# 10009458
Matrigel Corning Cat# 354230
SYBR green Roche Cat# 04913914001
Sphingosine-1-phosphate Cayman Chemical Cat# 62570
DNase I Sigma Cat# D5025
Bovine serum albumin (BSA) MP Biomedicals Cat# 9048-46-8
Bovine serum albumin (BSA, fatty acid free) Sigma Cat# A8806
Trypan blue Lonza Cat# 17-942E
Paraformaldehyde Sigma Cat# P6148
Agarose Dot Scientific Cat# CGLE-500
DAPI Sigma Cat# D9542
Dextran-coated charcoal Sigma Cat# C6241
Dulbecco's modified Eagle’s medium (DMEM) Corning Cat# 10-013-CV
HEPES Thermo Fisher Scientific Cat# 15630106
Fetal bovine serum (FBS, heat inactivated) Hyclone Cat# SH30910.03
Penicillin-streptomycin Thermo Fisher Scientific Cat# 15140122
Gentamicin Sigma Cat# G1397
Amphotericin Thermo Fisher Scientific Cat# 15290018
Insulin-transferrin-selenium (ITS) Sigma Cat# I1884-1VL
Antibiotic-antimycotic (Anti-Anti) Thermo Fisher Scientific Cat# 15240062
Dulbecco's modified Eagle’s medium: nutrient mixture F-12 (DMEM/F-12) Thermo Fisher Scientific Cat# 4192001
Corning collagen I, rat Corning Cat# 354236
RBC lysis buffer eBioscience Cat# 00-4333-57
Eagle's minimum essential medium (EMEM) ATCC Cat# 30-2003

Critical commercial assays

RNeasy mini kit Qiagen Cat# 74104

Experimental models: cell lines

Mlg mouse lung fibroblast cells ATCC CCL-206

Experimental models: organisms/strains

Mouse: SpC-CreER (Sfptctm(cre/ERT2)Blh) From Dr. Brigid Hogan, Duke University N/A
Mouse: ROSA-Tomato (B6.Cg-Gt(ROSA)26Sortm14(CAG-tdTomato)Hze/J) The Jackson Laboratory Stock# 007914
Mouse: mTmG (Gt(ROSA)26Sortm4(ACTB-tdTomato,-EGFP)Luo/J) The Jackson Laboratory Stock# 007576

Software and algorithms

ZEN v2.3 Zeiss Microscopy https://www.zeiss.com/microscopy/us/products/microscope-software/zen.html

Other

Corn oil Mazola N/A
70 μm cell strainer Corning Falcon Cat# 352350
20 μm nylon gauze Fisher Scientific Cat# 08-801-15
100 mm tissue culture plate Dot Scientific Cat# 667621
Phosphate buffered saline Sigma Cat# P3813
15 mm round glass coverslip VWR Cat# CLS-1760-015
18 mm round glass coverslip VWR Cat# 72229-01
6.5 mm Transwell inserts (0.45 μm pore size) Corning Cat# 3413
Glass slides Fisher 12-550-15
24-well cell culture plate Denville Cat# T1024
MagRack (magnetic rack) Sigma Cat# GE28-9489-64
Cytospin cytocentrifuge Thermo Fisher Scientific N/A
MoFlo Astrios cell sorter Beckman Coulter N/A